Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC018437.1-201ENST00000492214 406 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC092436.1-201ENST00000506450 503 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AP006587.4-201ENST00000526053 529 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 RPS3AP23-202ENST00000574601 686 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 BNIP3P8-201ENST00000597863 560 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 BNIP3P9-201ENST00000603714 553 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AL355816.2-201ENST00000610049 647 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AL355472.4-201ENST00000610233 626 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC013470.4-201ENST00000619978 986 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC024581.2-201ENST00000619986 252 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 DUXAP9-208ENST00000622815 614 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 AC241585.2-209ENST00000638217 143 ntBASIC1.93□□□□□ -2.1
COL21A1Q96P44 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
COL21A1Q96P44 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL21A1Q96P44 Y_RNA.18-201ENST00000362461 102 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 NEFMP1-201ENST00000443423 1006 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC003071.1-201ENST00000451219 789 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC020699.1-201ENST00000505161 445 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 MRPS33P3-201ENST00000513456 322 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 RNU6-1003P-201ENST00000517099 105 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 RNU6-201P-201ENST00000517100 61 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 MTND1P24-201ENST00000552175 861 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL121821.2-201ENST00000556081 394 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL133241.1-201ENST00000556832 487 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 MIR4648-201ENST00000580107 72 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.92□□□□□ -2.1
COL21A1Q96P44 MTCYBP22-201ENST00000603788 447 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 uc_338.12-201ENST00000616344 181 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC009090.3-201ENST00000616553 565 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 MIR6134-201ENST00000617606 109 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL353997.5-201ENST00000618886 171 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AL031601.2-202ENST00000622650 282 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 AC025048.6-202ENST00000627667 438 ntBASIC1.92□□□□□ -2.1
COL21A1Q96P44 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL21A1Q96P44 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 CDC27P3-201ENST00000635418 1910 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL21A1Q96P44 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 MTND4P35-201ENST00000604257 1375 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL21A1Q96P44 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL21A1Q96P44 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL21A1Q96P44 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 USP9YP8-201ENST00000441913 500 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 AL121769.1-201ENST00000469473 401 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 OR5AQ1P-201ENST00000527596 927 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 AL356432.3-201ENST00000568952 465 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 ROCK1P1-201ENST00000573767 549 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 MIR4782-201ENST00000577987 79 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 AC005261.5-201ENST00000596280 355 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.91□□□□□ -2.1
COL21A1Q96P44 AL358072.1-201ENST00000604156 575 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 AC016727.1-205ENST00000605437 569 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 RNU6-91P-201ENST00000607774 107 ntBASIC1.91□□□□□ -2.1
COL21A1Q96P44 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms