Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU4-92P-201ENST00000363783 136 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 SNORA38-201ENST00000363946 132 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 Y_RNA.224-201ENST00000364308 111 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 Y_RNA.327-201ENST00000365201 102 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
USP47Q96K76 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.18□□□□□ -2.06
USP47Q96K76 GPM6BP2-201ENST00000432046 144 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 RSU1P2-202ENST00000437884 485 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.18□□□□□ -2.06
USP47Q96K76 GPM6BP1-201ENST00000446387 144 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.18□□□□□ -2.06
USP47Q96K76 USP9YP25-201ENST00000457708 443 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.18□□□□□ -2.06
USP47Q96K76 HMGB3P3-201ENST00000510526 400 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 RNA5SP216-201ENST00000516111 123 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 RNA5SP490-201ENST00000517141 136 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 RN7SKP258-201ENST00000517151 304 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.18□□□□□ -2.06
USP47Q96K76 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.18□□□□□ -2.06
USP47Q96K76 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.18□□□□□ -2.06
USP47Q96K76 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.18□□□□□ -2.06
USP47Q96K76 AC024619.4-201ENST00000580924 316 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.18□□□□□ -2.06
USP47Q96K76 MIR3199-1-201ENST00000582434 88 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.18□□□□□ -2.06
USP47Q96K76 AL161798.1-201ENST00000604630 131 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 AL136313.1-201ENST00000624804 202 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USP47Q96K76 AC027514.1-201ENST00000588561 1603 ntBASIC2.18□□□□□ -2.06
USP47Q96K76 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
USP47Q96K76 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
USP47Q96K76 SNORA4.1-201ENST00000364263 144 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNU6-512P-201ENST00000364438 103 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNU6-392P-201ENST00000364926 101 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNA5SP363-201ENST00000365072 115 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNU6-1083P-201ENST00000384022 107 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 MIR620-201ENST00000385232 95 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNU6-278P-201ENST00000390945 109 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNU6-1176P-201ENST00000390955 107 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.17□□□□□ -2.06
USP47Q96K76 AL109913.1-201ENST00000421173 514 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AC092648.1-201ENST00000425870 423 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.17□□□□□ -2.06
USP47Q96K76 FCF1P6-201ENST00000456841 595 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.17□□□□□ -2.06
USP47Q96K76 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.17□□□□□ -2.06
USP47Q96K76 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USP47Q96K76 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.17□□□□□ -2.06
USP47Q96K76 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.17□□□□□ -2.06
USP47Q96K76 AC021739.1-201ENST00000559631 174 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.17□□□□□ -2.06
USP47Q96K76 AL592221.1-201ENST00000605266 382 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AL158042.1-201ENST00000605338 460 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 RNU4-5P-201ENST00000607255 135 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 AC005332.10-201ENST00000612725 619 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 DUSP12P1-201ENST00000612874 516 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 MTND4P9-201ENST00000507819 1346 ntBASIC2.17□□□□□ -2.06
USP47Q96K76 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.17□□□□□ -2.06
USP47Q96K76 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USP47Q96K76 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USP47Q96K76 RNU6-723P-201ENST00000383973 107 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 PIGPP2-201ENST00000411569 458 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.16□□□□□ -2.06
USP47Q96K76 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.16□□□□□ -2.06
USP47Q96K76 snoU13.18-201ENST00000459483 104 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 MRPL42P6-201ENST00000486397 371 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 AC055855.1-201ENST00000489563 579 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USP47Q96K76 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
USP47Q96K76 RNU6-64P-201ENST00000517119 105 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 SNORD53B-201ENST00000577887 78 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 MIR5571-201ENST00000577998 113 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.16□□□□□ -2.06
USP47Q96K76 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.16□□□□□ -2.06
USP47Q96K76 AL391813.1-201ENST00000603098 260 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 AC072039.2-201ENST00000608883 439 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 AC097478.2-201ENST00000610572 514 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.16□□□□□ -2.06
USP47Q96K76 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.16□□□□□ -2.06
USP47Q96K76 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
USP47Q96K76 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
USP47Q96K76 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USP47Q96K76 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.06
USP47Q96K76 RNU6-636P-201ENST00000384598 107 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AL359634.1-202ENST00000404721 284 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 MIR1305-201ENST00000408300 86 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 MIR1276-201ENST00000408707 83 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 RPL26P27-201ENST00000414397 437 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.15□□□□□ -2.07
USP47Q96K76 AC005094.1-201ENST00000440420 368 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AC009474.2-201ENST00000451383 136 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 RPL37P6-201ENST00000460682 294 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USP47Q96K76 RPF2P2-201ENST00000504693 896 ntBASIC2.15□□□□□ -2.07
USP47Q96K76 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.15□□□□□ -2.07
USP47Q96K76 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.15□□□□□ -2.07
USP47Q96K76 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.15□□□□□ -2.07
USP47Q96K76 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 439 ms