Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 Z99497.1-201ENST00000421282 135 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 NUP35P1-201ENST00000422734 947 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VMP1Q96GC9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC022493.1-201ENST00000492984 337 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC005178.1-201ENST00000508392 440 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC117522.2-201ENST00000510049 657 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC108078.2-201ENST00000510750 236 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 Y_RNA.672-201ENST00000516289 104 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AP003467.2-201ENST00000520175 319 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VMP1Q96GC9 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 ZNF321P-202ENST00000550843 495 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 PSMA3P-201ENST00000555485 635 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC093424.1-201ENST00000604999 338 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VMP1Q96GC9 AL139286.2-201ENST00000606838 396 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 AC010378.1-201ENST00000619270 362 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
VMP1Q96GC9 AP003400.5-201ENST00000624827 617 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.59□□□□□ -1.99
VMP1Q96GC9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.59□□□□□ -2
VMP1Q96GC9 AC103710.2-202ENST00000641454 2853 ntBASIC2.59□□□□□ -2
VMP1Q96GC9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VMP1Q96GC9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.58□□□□□ -2
VMP1Q96GC9 AC006020.1-201ENST00000420179 1854 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 RNY1P12-201ENST00000364251 105 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AL138827.1-201ENST00000402666 306 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.58□□□□□ -2
VMP1Q96GC9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.58□□□□□ -2
VMP1Q96GC9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.58□□□□□ -2
VMP1Q96GC9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.58□□□□□ -2
VMP1Q96GC9 AL627311.1-201ENST00000431514 115 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AL161788.1-201ENST00000441805 169 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 RPL7P43-201ENST00000478876 753 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.58□□□□□ -2
VMP1Q96GC9 AC117522.1-201ENST00000509821 380 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AC112673.1-201ENST00000513168 575 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AC114781.4-201ENST00000513707 639 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 RN7SKP287-201ENST00000516546 266 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.58□□□□□ -2
VMP1Q96GC9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.58□□□□□ -2
VMP1Q96GC9 RPL21P5-201ENST00000554662 472 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 AC012409.4-201ENST00000612923 249 ntBASIC2.58□□□□□ -2
VMP1Q96GC9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.58□□□□□ -2
VMP1Q96GC9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
VMP1Q96GC9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 RNU1-72P-201ENST00000362976 153 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 SNORD114-19-201ENST00000363072 75 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 Y_RNA.560-201ENST00000384689 102 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 MIR558-201ENST00000384920 94 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 RPL23AP32-201ENST00000395315 459 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 UBE2V1P2-201ENST00000397758 440 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 Y_RNA.598-201ENST00000410480 95 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 AC138623.1-201ENST00000418060 216 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.57□□□□□ -2
VMP1Q96GC9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 AL160275.3-201ENST00000423876 471 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 MED13P1-201ENST00000428342 171 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.57□□□□□ -2
VMP1Q96GC9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.57□□□□□ -2
VMP1Q96GC9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 NDUFB1P2-201ENST00000449477 176 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 MTAPP1-201ENST00000489154 819 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 RNA5SP356-201ENST00000515972 94 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 RNU6-123P-201ENST00000516163 102 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 RNU7-193P-201ENST00000516723 65 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
VMP1Q96GC9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.57□□□□□ -2
VMP1Q96GC9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.57□□□□□ -2
VMP1Q96GC9 AC025165.5-201ENST00000602802 578 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AL022161.1-201ENST00000604390 213 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 AC018638.7-201ENST00000605836 1114 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 MIR3529-201ENST00000637713 78 ntBASIC2.57□□□□□ -2
VMP1Q96GC9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.57□□□□□ -2
VMP1Q96GC9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VMP1Q96GC9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VMP1Q96GC9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
VMP1Q96GC9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.56□□□□□ -2
VMP1Q96GC9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms