Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC138393.1-203ENST00000327086 343 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 MIR34A-201ENST00000385130 110 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 MIR670-201ENST00000390142 98 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 RNU6-1106P-201ENST00000390845 107 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 RN7SKP53-201ENST00000411337 315 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 YPEL5P1-201ENST00000419731 367 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC002075.2-201ENST00000425207 252 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 SKA2P1-201ENST00000425592 390 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AL158071.1-201ENST00000430315 461 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC091286.1-201ENST00000431233 461 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AL645568.3-201ENST00000433683 316 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC011005.2-201ENST00000487324 359 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 RNU1-86P-201ENST00000516108 154 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 RNU1-107P-201ENST00000516617 154 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC090971.5-201ENST00000621102 293 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC092628.2-201ENST00000622492 339 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC022336.2-201ENST00000568966 2538 ntBASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 CUL1P1-201ENST00000509510 2425 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 Y_RNA.623-201ENST00000411128 95 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 ATG3P1-201ENST00000419507 911 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC007560.1-201ENST00000426912 237 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AL627311.1-201ENST00000431514 115 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 BRK1P2-201ENST00000442875 223 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC139453.3-201ENST00000493276 369 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC092436.3-201ENST00000511788 257 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RN7SKP13-201ENST00000515933 244 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 CASP1P1-201ENST00000526345 212 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC008739.3-201ENST00000603262 127 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC133104.2-201ENST00000615272 193 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 PISRT1.1-201ENST00000616930 107 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTHRC1Q96CG8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RNU6-1329P-201ENST00000365664 107 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RNU6-43P-201ENST00000384302 107 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 Y_RNA.579-201ENST00000390939 94 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RNY4P36-201ENST00000391116 96 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RNU6-954P-201ENST00000411355 107 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 RPL7P37-201ENST00000425095 738 ntBASIC3.3□□□□□ -1.88
CTHRC1Q96CG8 MYL8P-204ENST00000431574 518 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms