Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SH3KBP1Q96B97 Y_RNA.33-201ENST00000362591 102 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 Y_RNA.89-201ENST00000363031 102 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RNU6-715P-201ENST00000365204 103 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RNU6-658P-201ENST00000384606 106 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RNU6-1179P-201ENST00000384667 107 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 MIR767-201ENST00000390228 109 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 CIR1P3-201ENST00000405137 479 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RPS4XP7-201ENST00000406274 780 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RNU4-46P-201ENST00000410818 138 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RNA5SP492-201ENST00000411330 114 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 EEF1A1P40-201ENST00000412883 573 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 MTCYBP5-201ENST00000423752 1135 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AL365496.1-201ENST00000426885 215 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SEPT14P3-201ENST00000439401 183 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AL732372.2-207ENST00000445840 183 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 NFU1P2-201ENST00000448700 469 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SEPT14P2-201ENST00000453405 183 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SCARNA18-201ENST00000459004 134 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RPL21P41-201ENST00000459863 264 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SEM1P1-201ENST00000506694 209 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SEPT14P4-201ENST00000513445 186 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RNU1-103P-201ENST00000516502 125 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 RN7SKP57-201ENST00000517248 293 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 FO082796.1-201ENST00000523795 183 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SUB1P1-201ENST00000524415 382 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AP003122.3-201ENST00000526316 255 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC084851.1-201ENST00000529105 249 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC005498.1-201ENST00000592125 465 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC005000.2-201ENST00000605468 310 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 YPEL5P2-201ENST00000605553 359 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 DUSP12P1-201ENST00000612874 516 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AP001486.3-201ENST00000615334 372 ntBASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
SH3KBP1Q96B97 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 Y_RNA.111-201ENST00000363248 100 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 Y_RNA.248-201ENST00000364501 109 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 RNU4-66P-201ENST00000365199 138 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 RNU6-877P-201ENST00000383868 107 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 RNU6-908P-201ENST00000410160 94 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 NDUFB4P5-201ENST00000415445 361 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AL714022.1-201ENST00000439897 151 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC022493.1-201ENST00000492984 337 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 FAM92A1P2-202ENST00000504766 877 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC009902.1-201ENST00000519351 183 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC092325.1-201ENST00000566449 554 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 MIR548AC-201ENST00000585049 88 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 HMGN2P15-201ENST00000585707 270 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC068944.2-201ENST00000610373 403 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 MIR7112-201ENST00000616126 65 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 uc_338.11-201ENST00000619132 160 ntBASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 FER-210ENST00000628534 558 ntTSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SH3KBP1Q96B97 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 SNORD3E-201ENST00000362899 217 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 SNORA75B-201ENST00000384053 137 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 SNORD70.1-201ENST00000391007 85 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 FO393413.1-201ENST00000402892 195 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 RNU2-25P-201ENST00000411041 191 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 OR9R1P-201ENST00000412200 877 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AL358075.3-201ENST00000426289 226 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 UBBP3-201ENST00000445497 241 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 RPL26P9-201ENST00000457466 433 ntBASIC3.22□□□□□ -1.89
SH3KBP1Q96B97 HMGN1P18-201ENST00000457642 277 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms