Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 SNORA74D-201ENST00000516404 141 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RNU7-51P-201ENST00000516560 62 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.708-201ENST00000516950 96 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 AP006245.1-201ENST00000522549 120 ntBASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SH3RF3Q8TEJ3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.380-201ENST00000365663 111 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-641P-201ENST00000384006 107 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.483-201ENST00000384380 101 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.555-201ENST00000384673 110 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AL109755.1-201ENST00000401791 649 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 SNORA11.2-201ENST00000408318 127 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 MIR548I2-201ENST00000408348 149 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 SNAP23P1-201ENST00000433229 246 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC108734.1-201ENST00000439549 399 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 SNORD116.3-201ENST00000517176 78 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 MIR3910-1-201ENST00000580936 111 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC020914.4-201ENST00000597690 277 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC078899.3-201ENST00000599065 212 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC097714.1-201ENST00000511272 1647 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AL138713.1-201ENST00000624026 2130 ntBASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF3Q8TEJ3 AC027287.1-201ENST00000553115 1453 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.14-201ENST00000362415 103 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-562P-201ENST00000362731 107 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.428-201ENST00000384078 102 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-432P-201ENST00000384196 109 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 Y_RNA.461-201ENST00000384263 103 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 MIR450B-201ENST00000401182 78 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RNU2-38P-201ENST00000410856 79 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC114491.1-201ENST00000416095 246 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC244098.2-201ENST00000422068 99 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AL590632.1-201ENST00000424289 371 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC139712.2-201ENST00000424302 339 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC236972.1-201ENST00000433225 199 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RPL21P112-201ENST00000434403 463 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 HIGD1AP11-201ENST00000438361 280 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 FO393415.2-201ENST00000480085 343 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RPL32P34-201ENST00000486380 400 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RNA5SP384-201ENST00000516615 116 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 IGKV2-23-201ENST00000518729 323 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC011979.2-201ENST00000527568 352 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 MIR7112-201ENST00000616126 65 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 PISRT1.1-201ENST00000616930 107 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AC091903.1-201ENST00000624322 454 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 AL512643.1-201ENST00000635735 524 ntBASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF3Q8TEJ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 MFSD8-233ENST00000641482 4860 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 SNORA31-201ENST00000362607 130 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RNU1-18P-201ENST00000363062 164 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RNA5SP197-201ENST00000363357 119 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 SNORA7.2-201ENST00000364446 145 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-200P-201ENST00000364743 107 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 RNU6-61P-201ENST00000365528 109 ntBASIC4.1□□□□□ -1.75
SH3RF3Q8TEJ3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms