Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PIGFP2-201ENST00000421400 651 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC008267.5-201ENST00000424928 265 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 ZNF965P-201ENST00000432501 817 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 UBE2V1P8-201ENST00000437166 265 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 PGBD4P5-201ENST00000445958 426 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 COX6CP18-201ENST00000448769 222 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC013828.1-201ENST00000481845 158 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 MIR4648-201ENST00000580107 72 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 MIR3683-201ENST00000580847 82 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 MIR4661-201ENST00000582720 75 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC023043.2-201ENST00000589678 1026 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AP001542.2-201ENST00000593141 364 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 RPL30P11-203ENST00000598995 310 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AC211469.2-201ENST00000605461 205 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AP001033.2-201ENST00000609701 1003 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 MIR6134-201ENST00000617606 109 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 AL590808.1-201ENST00000618696 141 ntBASIC0.53□□□□□ -2.32
SPTSSBQ8NFR3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-839P-201ENST00000363347 108 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-112P-201ENST00000363599 104 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 SNORA48.2-201ENST00000390926 124 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-174P-201ENST00000410406 106 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 RNU2-32P-201ENST00000411193 191 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 MTATP6P27-201ENST00000416987 621 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 GDI2P2-201ENST00000445131 608 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 OR2AQ1P-201ENST00000451972 200 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC108729.1-201ENST00000487812 947 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 RPL30P1-201ENST00000488676 339 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC069306.1-201ENST00000507006 843 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AP003033.1-201ENST00000527244 415 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AP003392.2-201ENST00000527269 208 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 TRAV32-201ENST00000553993 340 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC079148.1-201ENST00000565944 819 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC098614.4-201ENST00000607601 462 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 Z82243.1-201ENST00000609432 473 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 IGHVIII-44-202ENST00000636235 289 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 MFSD8-213ENST00000641134 1327 ntBASIC0.52□□□□□ -2.33
SPTSSBQ8NFR3 AC008163.1-202ENST00000636004 2889 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 Y_RNA.99-201ENST00000363138 105 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC119751.3-201ENST00000399720 670 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 RN7SKP61-201ENST00000410642 295 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 HMGB1P27-201ENST00000431429 603 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC002542.1-201ENST00000440683 193 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 FABP5P15-201ENST00000453566 214 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC026410.2-201ENST00000460281 156 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 UBL5P3-201ENST00000475112 231 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC087343.1-201ENST00000477341 475 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 RPL36AP21-201ENST00000490372 323 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC010460.2-201ENST00000509054 677 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC112198.4-201ENST00000515450 351 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC022616.8-201ENST00000533569 253 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 EIF4BP1-201ENST00000554881 351 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC136619.2-201ENST00000563361 631 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 MIR4429-201ENST00000580105 73 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 MIR3660-201ENST00000584845 100 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AL390838.2-201ENST00000602394 274 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 MIR8063-201ENST00000621930 81 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AP001002.2-201ENST00000625137 386 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC068205.3-201ENST00000636385 468 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 AC099654.5-201ENST00000636479 350 ntBASIC0.51□□□□□ -2.33
SPTSSBQ8NFR3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 SNORD114-2-201ENST00000363953 78 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-546P-201ENST00000383991 107 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-637P-201ENST00000384050 107 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 RNU6-296P-201ENST00000384608 107 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 AL161935.2-201ENST00000414627 60 ntBASIC0.5□□□□□ -2.33
SPTSSBQ8NFR3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms