Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR6128-201ENST00000615528 109 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC007485.1-201ENST00000616755 206 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 U4.6-201ENST00000621618 127 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AP001486.2-201ENST00000561652 5113 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 IPO8P1-201ENST00000455509 3109 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.452-201ENST00000384202 108 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.473-201ENST00000384333 102 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-1106P-201ENST00000390845 107 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 UBA52P6-201ENST00000399822 382 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AL139039.1-201ENST00000401900 692 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 RNU2-43P-201ENST00000410306 190 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.594-201ENST00000410373 140 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AL160004.2-201ENST00000432935 350 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AC009901.1-201ENST00000506703 541 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 RN7SKP258-201ENST00000517151 304 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 MIR3124-201ENST00000582636 67 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AC006006.1-201ENST00000603082 144 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AC009229.3-201ENST00000608056 282 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AL359547.2-201ENST00000615810 418 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 AC092608.2-201ENST00000624427 218 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 ZNF807-201ENST00000328088 1707 ntBASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC44A3Q8N4M1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SLC44A3Q8N4M1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SLC44A3Q8N4M1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SLC44A3Q8N4M1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 RNY1P14-201ENST00000384426 108 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-817P-201ENST00000391083 104 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AC008264.1-201ENST00000447612 367 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 RN7SL504P-201ENST00000494496 287 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-1332P-201ENST00000516666 104 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.708-201ENST00000516950 96 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 IGKV2-26-201ENST00000518305 343 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 CYCSP27-201ENST00000527643 293 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AC004817.2-201ENST00000561794 651 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 MIR5680-201ENST00000577577 84 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 MIR3149-201ENST00000584629 83 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AC104763.2-201ENST00000604179 382 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AL049641.1-201ENST00000441055 1948 ntBASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SLC44A3Q8N4M1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.193-201ENST00000363979 102 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 HLFP1-201ENST00000402375 499 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-1050P-201ENST00000410388 107 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 RNA5SP111-201ENST00000411386 101 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 HMGB3P2-201ENST00000411913 584 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AL160275.3-201ENST00000423876 471 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC108059.2-201ENST00000434626 151 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 SNORD5.1-201ENST00000458800 75 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 MTATP8P1-201ENST00000467115 207 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 TRBV12-2-201ENST00000489763 344 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-764P-201ENST00000516396 105 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-677P-201ENST00000516914 101 ntBASIC3.64□□□□□ -1.83
SLC44A3Q8N4M1 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms