Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.86□□□□□ -2.27
VPS8Q8N3P4 AL138955.1-201ENST00000622881 1040 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 RBBP8P1-201ENST00000449447 1844 ntBASIC0.86□□□□□ -2.27
VPS8Q8N3P4 MIR193B-201ENST00000384907 83 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 MIR518D-201ENST00000385014 87 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VPS8Q8N3P4 AP1S2P1-201ENST00000457344 379 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 snoU13.9-201ENST00000458927 103 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 VPS26AP1-201ENST00000483197 979 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 RNU6-902P-201ENST00000517212 91 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 AC087854.1-201ENST00000519706 414 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 NIFKP6-201ENST00000598115 845 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 AC080013.4-201ENST00000607624 649 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 AC006213.4-201ENST00000616184 634 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 AL121890.5-201ENST00000620848 304 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 ELL2P3-201ENST00000457883 1602 ntBASIC0.85□□□□□ -2.27
VPS8Q8N3P4 RNU6-486P-201ENST00000363116 107 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 MIR561-201ENST00000385216 97 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 MIR92A1-201ENST00000385233 78 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AC009310.1-201ENST00000414414 451 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 UBE2V1P4-201ENST00000425374 344 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS8Q8N3P4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AL135790.2-201ENST00000437701 267 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS8Q8N3P4 CYP2C59P-201ENST00000457790 269 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 UBL5P1-201ENST00000507979 193 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AC005668.1-201ENST00000571142 476 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AC136932.1-201ENST00000574771 208 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 AC007349.4-201ENST00000608114 532 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 MIR8074-201ENST00000615081 81 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.84□□□□□ -2.27
VPS8Q8N3P4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
VPS8Q8N3P4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 MIR625-201ENST00000385047 85 ntBASIC0.83□□□□□ -2.28
VPS8Q8N3P4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 FO393419.3-201ENST00000428741 282 ntBASIC0.83□□□□□ -2.28
VPS8Q8N3P4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 C1DP3-201ENST00000455013 423 ntBASIC0.83□□□□□ -2.28
VPS8Q8N3P4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 AL512506.2-201ENST00000624472 458 ntBASIC0.83□□□□□ -2.28
VPS8Q8N3P4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS8Q8N3P4 RNA5SP347-201ENST00000362445 119 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 CST2P1-201ENST00000425770 87 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AL591043.1-201ENST00000432461 424 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC104073.1-201ENST00000451988 151 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS8Q8N3P4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS8Q8N3P4 RPL26P9-201ENST00000457466 433 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC092757.1-201ENST00000467293 467 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AP003122.4-201ENST00000530980 758 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AL355472.4-201ENST00000610233 626 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC012676.2-201ENST00000619258 186 ntBASIC0.82□□□□□ -2.28
VPS8Q8N3P4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS8Q8N3P4 RNU6-16P-201ENST00000384385 107 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC092634.2-201ENST00000428146 1010 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC104806.1-201ENST00000508720 308 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 RNU6-202P-201ENST00000515998 96 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 RNU6-496P-201ENST00000516145 99 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AL359212.1-201ENST00000556608 614 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 SULT1C2P1-202ENST00000562418 459 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 SNORD114-23-201ENST00000363536 72 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 HMGB1P17-201ENST00000403495 628 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC098934.3-201ENST00000430450 190 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC245047.4-201ENST00000433189 144 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AL392003.1-201ENST00000434394 243 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC090115.3-201ENST00000553218 849 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC024595.1-201ENST00000623088 387 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
VPS8Q8N3P4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 C1DP1-201ENST00000426049 402 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 PRPS1P1-201ENST00000445305 876 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 AP001025.1-201ENST00000486139 332 ntBASIC0.8□□□□□ -2.28
VPS8Q8N3P4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS8Q8N3P4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms