Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SNORA31.5-201ENST00000516190 133 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC245166.1-201ENST00000521012 253 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AL355598.1-201ENST00000604169 202 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 RMST_3.1-201ENST00000611651 109 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 U6.42-201ENST00000618440 107 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC073308.1-201ENST00000623696 305 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 MTND4P35-201ENST00000604257 1375 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.94□□□□□ -1.94
BEST3Q8N1M1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.94□□□□□ -1.94
BEST3Q8N1M1 AC004520.1-201ENST00000608362 1413 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 SRP72P2-201ENST00000344851 1979 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 RNU6-45P-201ENST00000384471 107 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 MIR514A2-201ENST00000385131 88 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 MIR514A3-201ENST00000385132 88 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 SNORD70.1-201ENST00000391007 85 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 RPL21P90-201ENST00000415692 466 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC099548.1-201ENST00000421443 426 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 MTCO3P18-201ENST00000440206 761 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 BRK1P2-201ENST00000442875 223 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 WASF1P1-201ENST00000447560 1131 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 RPS15AP27-201ENST00000449183 343 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 RPL21P99-201ENST00000480369 423 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC139453.3-201ENST00000493276 369 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC069439.1-201ENST00000494739 167 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC009901.1-201ENST00000506703 541 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC008716.1-201ENST00000511084 513 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 RNU6-358P-201ENST00000516564 75 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 BNIP3P6-201ENST00000549284 499 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 MTCO3P24-201ENST00000572729 782 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 AC135507.2-201ENST00000612443 309 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 uc_338.25-201ENST00000613756 156 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 PLCE1P1-201ENST00000622094 305 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BEST3Q8N1M1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
BEST3Q8N1M1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 RNU6-82P-201ENST00000363970 107 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 RNU4-20P-201ENST00000365601 151 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 MIR578-201ENST00000384828 96 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 UBA52P6-201ENST00000399822 382 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AL138885.1-201ENST00000405921 675 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 HMGN2P30-201ENST00000423237 256 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 SRIP2-201ENST00000428470 166 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AL669831.1-202ENST00000428504 417 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 GTF2IP13-201ENST00000438487 386 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 snoU13.28-201ENST00000459235 104 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AC022493.1-201ENST00000492984 337 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AC009902.1-201ENST00000519351 183 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AC025755.1-201ENST00000521306 278 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AF235103.2-201ENST00000525753 346 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 U2.21-201ENST00000637295 81 ntBASIC2.92□□□□□ -1.94
BEST3Q8N1M1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.92□□□□□ -1.94
BEST3Q8N1M1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
BEST3Q8N1M1 MIR412-201ENST00000362142 91 ntBASIC2.91□□□□□ -1.94
BEST3Q8N1M1 Y_RNA.157-201ENST00000363638 102 ntBASIC2.91□□□□□ -1.94
BEST3Q8N1M1 RNU6-884P-201ENST00000363889 107 ntBASIC2.91□□□□□ -1.94
BEST3Q8N1M1 SNORA7.4-201ENST00000384249 137 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms