Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HMGB1P24-202ENST00000615653 685 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 U2.1-201ENST00000618978 145 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 AC008669.1-201ENST00000565823 2178 ntBASIC3.95□□□□□ -1.78
TRIM48Q8IWZ4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AL138885.1-201ENST00000405921 675 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 RPL23AP48-201ENST00000406913 488 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 RNU2-33P-201ENST00000410344 192 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 RNA5SP306-201ENST00000411087 107 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AL358472.1-201ENST00000431295 329 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC087650.1-201ENST00000431445 468 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC133134.1-201ENST00000466800 359 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 RPL22P13-201ENST00000493291 347 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC009812.2-201ENST00000517657 457 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC007991.1-201ENST00000522680 631 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC106785.1-201ENST00000565935 262 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 MYL12BP1-201ENST00000569826 507 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC012603.1-201ENST00000606424 528 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 MIR6868-201ENST00000611215 58 ntBASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM48Q8IWZ4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC116096.1-201ENST00000566804 2314 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 MIR1251-201ENST00000408552 70 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 RPS15AP10-201ENST00000432472 382 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 snoU109.2-201ENST00000459316 135 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 RN7SL283P-201ENST00000489055 303 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC022616.4-201ENST00000522985 181 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC040926.1-201ENST00000530195 238 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC006600.1-201ENST00000572529 153 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC008121.1-201ENST00000603244 268 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AL355297.3-201ENST00000604082 446 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AC064801.1-201ENST00000612025 407 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 AL161629.2-201ENST00000615347 275 ntBASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM48Q8IWZ4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 RNA5SP388-201ENST00000362584 119 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 SNORA37-201ENST00000384504 129 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 MIR325-201ENST00000385260 98 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 TOMM20P4-201ENST00000427861 435 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AL627311.1-201ENST00000431514 115 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 RPS29P7-201ENST00000439662 171 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC006517.1-201ENST00000480485 328 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 RPL21P13-201ENST00000488305 481 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC146944.2-203ENST00000502493 354 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC017037.1-201ENST00000508460 471 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC139495.1-202ENST00000513164 354 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 Vault.1-201ENST00000516474 102 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 RNU6-572P-201ENST00000516724 80 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC107016.1-201ENST00000550463 337 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC004805.2-201ENST00000605382 482 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 MIR432-201ENST00000606207 94 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AL021879.1-201ENST00000611756 288 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC103858.2-201ENST00000621471 543 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 AC090617.7-201ENST00000623952 126 ntBASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM48Q8IWZ4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRIM48Q8IWZ4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms