Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 GMPSP1-201ENST00000514075 579 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 SNORA27.4-201ENST00000516650 95 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 SNORA31.22-201ENST00000517204 135 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AP001781.1-201ENST00000530977 207 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC233702.2-202ENST00000562547 291 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 MIR5096-201ENST00000583713 70 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AL359881.1-201ENST00000602916 267 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AC083809.1-201ENST00000615051 472 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 AL161629.2-201ENST00000615347 275 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 LINC00901.1-201ENST00000617252 152 ntBASIC4.08□□□□□ -1.76
ATG4DQ86TL0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ATG4DQ86TL0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 OR4G2P-202ENST00000641004 1759 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 RNU6-1325P-201ENST00000364905 105 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 RPL7AP73-201ENST00000413490 353 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 RPL18P10-201ENST00000425606 538 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 IFNA11P-201ENST00000446352 526 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 NUTF2P7-201ENST00000453086 375 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 RPS27P26-201ENST00000494583 239 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 AC010928.2-201ENST00000588017 287 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 AC060766.3-201ENST00000591442 263 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 AC008749.1-201ENST00000597650 306 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.07□□□□□ -1.76
ATG4DQ86TL0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATG4DQ86TL0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 RNA5SP307-201ENST00000362863 116 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 RNU6-227P-201ENST00000362865 103 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 RNU5A-5P-201ENST00000411054 116 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AL732292.1-201ENST00000426692 226 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AL512844.2-201ENST00000433990 593 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AL162591.2-201ENST00000449634 317 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC007395.1-201ENST00000451333 677 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC073901.1-201ENST00000462471 408 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 RNU6-143P-201ENST00000516942 93 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC107918.3-201ENST00000533272 382 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC067852.4-201ENST00000590314 478 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 MIR6891-201ENST00000618788 93 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC099506.2-201ENST00000623074 221 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AC233981.2-201ENST00000611524 1614 ntBASIC4.06□□□□□ -1.76
ATG4DQ86TL0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4DQ86TL0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AL079305.1-201ENST00000623159 3008 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 MIR410-201ENST00000362222 80 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNU6-1298P-201ENST00000362456 101 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 Y_RNA.262-201ENST00000364641 102 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNA5SP22-201ENST00000365393 109 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNU6-395P-201ENST00000365662 106 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNU6-843P-201ENST00000384454 104 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNU6-178P-201ENST00000384631 104 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 MIR569-201ENST00000385228 96 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RPS4XP3-201ENST00000398541 413 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AL357075.1-201ENST00000404107 726 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 HDGFP1-201ENST00000405943 252 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AL357139.1-201ENST00000407792 426 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC091390.1-201ENST00000433904 331 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RPS15AP7-201ENST00000439294 405 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms