Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 MIR4790-201ENST00000577799 79 ntBASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 MIR3941-201ENST00000582572 103 ntBASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 KLKP1-201ENST00000595979 403 ntBASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AC073539.2-201ENST00000597113 165 ntBASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AL138726.1-201ENST00000614873 333 ntBASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AC022418.1-201ENST00000624118 445 ntBASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf139Q6ZV77 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RNU4-35P-201ENST00000362588 141 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.132-201ENST00000363421 102 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RNU6-512P-201ENST00000364438 103 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 SNORD116-11-201ENST00000383882 92 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RNU6-43P-201ENST00000384302 107 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 MIR578-201ENST00000384828 96 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 SNORD17-201ENST00000390930 237 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.579-201ENST00000390939 94 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RNA5SP120-201ENST00000410900 112 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC074085.1-201ENST00000413598 418 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RPL21P90-201ENST00000415692 466 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RPL7P10-201ENST00000417407 739 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 BTF3L4P3-201ENST00000418879 476 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 SKA2P1-201ENST00000425592 390 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AL592045.1-201ENST00000429867 352 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC008264.1-201ENST00000447612 367 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AL360271.2-201ENST00000447710 161 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC107399.1-201ENST00000451226 265 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.635-201ENST00000459041 101 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RPL21P10-201ENST00000463521 490 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RN7SL594P-201ENST00000470590 287 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RPS23P3-201ENST00000470993 430 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC093663.1-201ENST00000497190 394 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 RN7SKP24-201ENST00000515888 284 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 SCARNA15.2-201ENST00000516409 127 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 Y_RNA.718-201ENST00000517110 102 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC093249.1-201ENST00000567049 203 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC138761.3-201ENST00000579993 334 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 MIR3200-201ENST00000580767 85 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC022432.1-201ENST00000595739 310 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC098826.3-201ENST00000603823 466 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC126177.8-201ENST00000618339 1015 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 Z99571.1-201ENST00000636677 394 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 U6.98-201ENST00000637157 84 ntBASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
C9orf139Q6ZV77 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
C9orf139Q6ZV77 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 ZNF519P1-201ENST00000449011 1626 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 RNU6-1167P-201ENST00000363227 94 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 Y_RNA.326-201ENST00000365176 113 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 RNU6-1297P-201ENST00000384415 104 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 Z85995.1-201ENST00000415547 335 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 AC006989.1-201ENST00000427212 131 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 MTND1P17-201ENST00000448961 204 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 AC008526.1-201ENST00000509149 338 ntBASIC2.83□□□□□ -1.96
C9orf139Q6ZV77 MTND3P25-201ENST00000509243 135 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms