Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DEFB131C-201ENST00000528817 165 ntBASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 MIR3684-201ENST00000579779 74 ntBASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 MIR6758-201ENST00000620653 63 ntBASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 AC008873.1-201ENST00000625051 138 ntBASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXR1Q6PIV2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNU6-312P-201ENST00000364629 107 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNU6-395P-201ENST00000365662 106 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNU6-76P-201ENST00000384060 104 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNA5SP87-201ENST00000384155 118 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNU6-17P-201ENST00000384245 107 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNU6-18P-201ENST00000384527 107 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AL158156.1-201ENST00000422509 473 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC011753.3-201ENST00000443436 406 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC117440.1-201ENST00000474107 571 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RPL23AP75-201ENST00000491601 451 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNA5SP154-201ENST00000516193 111 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RNU6-567P-201ENST00000516746 107 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC100770.1-201ENST00000532310 322 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AP002001.1-203ENST00000534002 267 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AP006289.1-201ENST00000538089 277 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC069240.1-201ENST00000548774 375 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 MIR548X2-201ENST00000579776 100 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 MIR3667-201ENST00000581025 74 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC234771.5-201ENST00000600161 514 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AL355812.1-201ENST00000603215 216 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AL133393.1-201ENST00000603277 287 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC105254.2-201ENST00000603636 436 ntBASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXR1Q6PIV2 AC008079.2-201ENST00000623543 20396 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RNA5SP191-201ENST00000362585 102 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 SNORA73.1-201ENST00000363107 205 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 Y_RNA.238-201ENST00000364441 102 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RNVU1-6-201ENST00000364688 164 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RNU4-9P-201ENST00000364951 139 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RNU6-1175P-201ENST00000365200 107 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 SNORA46.1-201ENST00000391069 153 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 LAP3P1-201ENST00000403648 294 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AC004552.1-201ENST00000419089 348 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AC068287.1-201ENST00000430283 295 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 POLR2KP2-201ENST00000438155 177 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AC073264.2-201ENST00000448886 166 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RPS26P3-201ENST00000470205 348 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RN7SL41P-201ENST00000476144 297 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AC090543.2-201ENST00000483963 348 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AC004057.1-201ENST00000485827 348 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 SNORA25.12-201ENST00000516202 82 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 RNU6-966P-201ENST00000516479 104 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 BNIP3P5-201ENST00000562290 498 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 MAPK10-303ENST00000641324 3959 ntBASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXR1Q6PIV2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 SDAD1P1-202ENST00000524156 2051 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 AC139713.2-215ENST00000641428 5037 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 Y_RNA.182-201ENST00000363880 111 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 RNA5SP513-201ENST00000364648 118 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 RNU6-336P-201ENST00000364891 107 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 Y_RNA.357-201ENST00000365487 109 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 SNORA62-201ENST00000365493 153 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 SNORA36C-201ENST00000384289 132 ntBASIC4.87□□□□□ -1.63
FOXR1Q6PIV2 Z74021.1-201ENST00000423610 407 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms