Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR1252-201ENST00000408861 65 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-174P-201ENST00000410406 106 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RNA5SP306-201ENST00000411087 107 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 CYCSP33-201ENST00000414485 327 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC244098.2-201ENST00000422068 99 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AL139247.1-201ENST00000422768 325 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RPS15AP10-201ENST00000432472 382 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC133473.1-201ENST00000455173 299 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC087588.1-201ENST00000462203 316 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC106707.2-201ENST00000484182 374 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 HMGN1P11-201ENST00000508668 303 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC113155.1-201ENST00000511141 769 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-388P-201ENST00000517012 105 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-389P-201ENST00000517048 105 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.715-201ENST00000517082 110 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 CBX3P8-201ENST00000532412 525 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 MIR5195-201ENST00000583555 115 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC011471.1-201ENST00000585766 187 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC005357.1-201ENST00000588399 301 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AL773545.4-201ENST00000637262 310 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AL513478.4-201ENST00000641636 310 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 ZNF72P-201ENST00000425869 1908 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-874P-201ENST00000362390 105 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.33-201ENST00000362591 102 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 RNY1P16-201ENST00000363063 111 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.288-201ENST00000364854 92 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 DEFB109C-201ENST00000382575 264 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 DEFB109B-201ENST00000382656 264 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 MIR625-201ENST00000385047 85 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AL513475.1-201ENST00000406602 315 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 RNU2-3P-201ENST00000410144 191 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AL159987.2-201ENST00000432754 307 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 DYNLT3P2-201ENST00000442517 295 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AP004371.1-201ENST00000525240 214 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AC040926.1-201ENST00000530195 238 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 MIR1273C-201ENST00000578669 77 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 AC098826.3-201ENST00000603823 466 ntBASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF40BQ6NWY9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 RNU4-42P-201ENST00000364738 142 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 RNA5SP235-201ENST00000365411 114 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 MIR218-2-201ENST00000385006 110 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 NDUFB4P4-201ENST00000404822 243 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AL138885.1-201ENST00000405921 675 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 SNORA3C-201ENST00000408792 125 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 Z92545.1-201ENST00000411782 234 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 MTCO1P39-201ENST00000426148 480 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 TOMM20P4-201ENST00000427861 435 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 RPL21P2-201ENST00000440049 481 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 MTCO3P8-201ENST00000453691 755 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 SNORD108-201ENST00000459332 71 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 SNORA40.14-201ENST00000516543 86 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 IGKV2D-23-201ENST00000518179 286 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 TRAV32-201ENST00000553993 340 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AC006600.1-201ENST00000572529 153 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AL121917.1-203ENST00000605534 577 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 MIR3976-201ENST00000606807 139 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 AC107871.2-201ENST00000612894 502 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 RMST_4.1-201ENST00000616886 107 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 MIR8062-201ENST00000621515 85 ntBASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF40BQ6NWY9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms