Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC138393.2-201ENST00000414742 246 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 MTATP6P23-201ENST00000440153 476 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC125238.1-201ENST00000448842 249 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC091179.1-201ENST00000461606 579 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC116655.1-201ENST00000508324 901 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 RNU1-45P-201ENST00000517191 141 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 BTF3P12-201ENST00000519620 469 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC090136.1-201ENST00000520009 240 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 BNIP3P10-201ENST00000605360 577 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC004832.5-201ENST00000608677 401 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AL121757.2-201ENST00000611223 313 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC138627.2-201ENST00000624202 601 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC073073.2-201ENST00000609827 2578 ntBASIC3.56□□□□□ -1.84
PPP4R4Q6NUP7 AC004944.1-201ENST00000517807 3059 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 SNORA68.1-201ENST00000364537 132 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 Y_RNA.279-201ENST00000364763 95 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 RNU1-100P-201ENST00000365255 165 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 RNU6-72P-201ENST00000384285 79 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 MIR554-201ENST00000384874 96 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 MIR34A-201ENST00000385130 110 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 MIR199A2-201ENST00000385289 110 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 RNU6-876P-201ENST00000391295 104 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 U3.37-201ENST00000408528 213 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 HMGN2P31-201ENST00000432430 273 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 CYCSP35-201ENST00000451978 304 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC023632.4-201ENST00000517783 191 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC022695.1-201ENST00000522089 237 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC107953.1-201ENST00000522216 297 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 PSMA3P-201ENST00000555485 635 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 MIR5692C1-201ENST00000585309 91 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 APOOP1-201ENST00000604695 592 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC005344.1-201ENST00000613391 459 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 AC138915.1-201ENST00000565427 1685 ntBASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PPP4R4Q6NUP7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 Y_RNA.160-201ENST00000363677 92 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 Y_RNA.373-201ENST00000365600 103 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 USP9YP20-201ENST00000419224 558 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 PTGES3P4-201ENST00000426243 356 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 AC006989.1-201ENST00000427212 131 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 snoU109.2-201ENST00000459316 135 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 HMGN1P11-201ENST00000508668 303 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 Z69720.2-201ENST00000624755 279 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 FAM35CP-201ENST00000554755 2470 ntBASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
PPP4R4Q6NUP7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PPP4R4Q6NUP7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PPP4R4Q6NUP7 RNU6-942P-201ENST00000363002 107 ntBASIC3.53□□□□□ -1.84
PPP4R4Q6NUP7 RNU6-19P-201ENST00000384718 107 ntBASIC3.53□□□□□ -1.84
PPP4R4Q6NUP7 EIF4E2P1-201ENST00000393781 255 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 234.3 ms