Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATL3Q6DD88 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 SMIM11P1-201ENST00000369586 178 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 RNU5A-2P-201ENST00000384337 116 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 RAC1P6-201ENST00000423911 575 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AC104651.1-201ENST00000427559 735 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 NEFMP1-201ENST00000443423 1006 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 SNORD97-201ENST00000459187 142 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 SCARNA3-201ENST00000517097 143 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 MTND4LP18-201ENST00000526864 291 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 MIR4435-1-201ENST00000582552 80 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.28□□□□□ -2.04
ATL3Q6DD88 AC116312.1-201ENST00000606841 314 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AL355816.2-201ENST00000610049 647 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AL360219.1-201ENST00000610230 366 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AC027807.2-201ENST00000616099 408 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 AC079248.2-201ENST00000623779 326 ntBASIC2.28□□□□□ -2.04
ATL3Q6DD88 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.05
ATL3Q6DD88 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATL3Q6DD88 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATL3Q6DD88 NACAP2-201ENST00000318548 624 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 RNU6-960P-201ENST00000364056 120 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 RNU6-533P-201ENST00000384144 107 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 RNU6-220P-201ENST00000390919 107 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATL3Q6DD88 MTCYBP36-201ENST00000404146 440 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 Z99497.1-201ENST00000421282 135 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ATL3Q6DD88 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL590365.1-201ENST00000450788 243 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 RPL30P6-201ENST00000475925 342 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AP003181.2-201ENST00000528941 181 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AP003122.4-201ENST00000530980 758 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC010186.2-204ENST00000537668 439 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 MIR5571-201ENST00000577998 113 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AP001981.2-201ENST00000603241 418 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.6-201ENST00000603753 252 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.11-201ENST00000604059 253 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC008162.1-201ENST00000604718 254 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.1-201ENST00000604752 252 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.5-201ENST00000605253 252 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.12-201ENST00000605291 253 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.8-201ENST00000605353 252 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL670379.7-201ENST00000605823 252 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL031775.1-201ENST00000607014 887 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.27□□□□□ -2.05
ATL3Q6DD88 AL365204.3-201ENST00000612448 685 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC010678.1-201ENST00000614118 713 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC131159.1-201ENST00000621854 213 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 AC010149.2-201ENST00000637608 315 ntBASIC2.27□□□□□ -2.05
ATL3Q6DD88 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATL3Q6DD88 ADAM3A-203ENST00000461344 2157 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ATL3Q6DD88 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ATL3Q6DD88 Y_RNA.534-201ENST00000384599 112 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 RNU6-817P-201ENST00000391083 104 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 RPS12P24-201ENST00000412619 387 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 USP9YP6-201ENST00000413550 854 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 RPL22P17-201ENST00000438729 315 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 ZNF114P1-201ENST00000453500 292 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 MTND1P12-201ENST00000455231 147 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AF131216.2-201ENST00000512316 564 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 FAM92A1P1-201ENST00000528023 890 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC008015.1-201ENST00000555505 465 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC005261.5-201ENST00000596280 355 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 AC121334.2-201ENST00000605387 271 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 Z99289.3-201ENST00000605586 594 ntBASIC2.26□□□□□ -2.05
ATL3Q6DD88 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms