Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RPL23AP81-201ENST00000455252 467 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC109327.1-201ENST00000471666 403 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AL592156.1-201ENST00000508758 304 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 RNU6-138P-201ENST00000515952 107 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 ARF4P1-201ENST00000605447 541 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC114781.5-201ENST00000615297 108 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AP001273.1-201ENST00000624493 3152 ntBASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQA1Q5Y7H0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 U3.13-201ENST00000364804 214 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 Y_RNA.478-201ENST00000384358 107 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 SNORD66.1-201ENST00000391230 76 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPL21P75-201ENST00000396599 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPL21P28-201ENST00000401418 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RNA5SP36-201ENST00000410197 133 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPL23AP26-201ENST00000412728 464 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AL590556.1-201ENST00000423231 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AL157831.1-201ENST00000426134 473 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 C4BPAP2-201ENST00000428434 478 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 U8.22-201ENST00000459141 133 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPL21P11-201ENST00000461458 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPL21P39-201ENST00000463605 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPS29P19-201ENST00000479709 171 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC087190.1-201ENST00000484462 480 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC107032.1-201ENST00000485945 480 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC132942.1-201ENST00000486753 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC093591.1-201ENST00000491435 481 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RPL21P16-201ENST00000495531 483 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC067942.3-201ENST00000512025 362 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 IGKV2-23-201ENST00000518729 323 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC006064.5-201ENST00000541782 248 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AL442163.3-201ENST00000554110 156 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 TRAV28-201ENST00000557548 323 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC053481.4-201ENST00000583164 216 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC136601.2-201ENST00000604356 474 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 AC243829.7-201ENST00000633081 225 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 U6.92-201ENST00000636464 89 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 U6.99-201ENST00000637524 83 ntBASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DQA1Q5Y7H0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.96□□□□□ -1.77
HLA-DQA1Q5Y7H0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.96□□□□□ -1.77
HLA-DQA1Q5Y7H0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 MIR383-201ENST00000362257 73 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNU6-78P-201ENST00000362897 107 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 snoU2_19.2-201ENST00000363024 80 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 Y_RNA.237-201ENST00000364439 102 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNA5SP366-201ENST00000365454 123 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNU6-338P-201ENST00000383888 105 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 Y_RNA.416-201ENST00000384014 113 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 Y_RNA.539-201ENST00000384635 107 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 MIR325-201ENST00000385260 98 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RPS29P13-201ENST00000402041 169 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 MTCYBP2-201ENST00000407745 171 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 AC098614.2-201ENST00000426040 255 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 SDAD1P3-201ENST00000427380 333 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RPS6P12-201ENST00000432491 726 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 ABCF2P2-201ENST00000450549 296 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 UQCRHP4-201ENST00000471686 272 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 GZMAP1-201ENST00000503054 631 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNU7-175P-201ENST00000515915 61 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNA5SP49-201ENST00000516450 115 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNA5SP73-201ENST00000516744 108 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 AC104581.2-201ENST00000572227 430 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 AC099506.2-201ENST00000623074 221 ntBASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DQA1Q5Y7H0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms