Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC083809.1-201ENST00000615051 472 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
RNF220Q5VTB9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF220Q5VTB9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC138393.1-203ENST00000327086 343 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 MIR372-201ENST00000362225 67 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC022028.1-201ENST00000412054 408 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 C4BPAP2-201ENST00000428434 478 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 OR4C10P-201ENST00000434991 931 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 TPT1P12-201ENST00000448968 492 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 PPP1R2P5-201ENST00000457256 603 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 RPL7P43-201ENST00000478876 753 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC091951.2-201ENST00000500762 203 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC116655.1-201ENST00000508324 901 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC114781.4-201ENST00000513707 639 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 SNORA64.4-201ENST00000516632 81 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 MIR2116-201ENST00000517221 80 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 CYCSP30-201ENST00000546447 172 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC025423.5-201ENST00000550230 219 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC025281.1-201ENST00000567026 265 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 MIR3672-201ENST00000584290 82 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 MIR3942-201ENST00000585264 109 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AL606490.9-201ENST00000603331 271 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC123912.5-201ENST00000605470 343 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 MIR6798-201ENST00000612887 67 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 FAM157A-202ENST00000615155 405 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC063943.3-201ENST00000615562 356 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 AC104260.1-201ENST00000616660 539 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 RMST_7.1-201ENST00000621935 268 ntBASIC3.45□□□□□ -1.86
RNF220Q5VTB9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF220Q5VTB9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC008669.1-201ENST00000565823 2178 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 SNORA70.2-201ENST00000364506 135 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 RNU1-100P-201ENST00000365255 165 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 RNA5SP354-201ENST00000391247 136 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 SNORA3.3-201ENST00000408712 125 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 SNORD56-201ENST00000413522 71 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 RPL21P40-201ENST00000428586 483 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AL365400.1-201ENST00000431854 640 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC005019.1-201ENST00000436455 431 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC092001.1-201ENST00000453012 261 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 RN7SL323P-201ENST00000494712 295 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 MTCO1P35-201ENST00000515270 228 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 RNU6-581P-201ENST00000516214 105 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 RNU6-1332P-201ENST00000516666 104 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 SCARNA14-201ENST00000516903 136 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 SNORD19.2-201ENST00000516978 73 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC109479.2-201ENST00000517842 174 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC104027.1-201ENST00000521887 300 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC022695.1-201ENST00000522089 237 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 IGHV3-76-201ENST00000522465 295 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC010653.1-201ENST00000571108 881 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC005668.1-201ENST00000571142 476 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC025253.1-201ENST00000613623 543 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AL138726.1-201ENST00000614873 333 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AL079305.1-201ENST00000623159 3008 ntBASIC3.44□□□□□ -1.86
RNF220Q5VTB9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNU5E-4P-201ENST00000364931 120 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 Y_RNA.301-201ENST00000364990 103 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 SNORD81.2-201ENST00000365153 76 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNU5E-7P-201ENST00000365290 117 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF220Q5VTB9 CD24P4-201ENST00000382840 243 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 MIR767-201ENST00000390228 109 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 RNU6-1009P-201ENST00000390996 107 ntBASIC3.43□□□□□ -1.86
RNF220Q5VTB9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms