Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 SNORA4.3-201ENST00000365564 137 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 SNORD116-11-201ENST00000383882 92 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 MIR490-201ENST00000384865 128 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 MIR34B-201ENST00000385076 84 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 RN7SKP158-201ENST00000410453 326 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 RPL21P66-201ENST00000426566 466 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AL359273.1-201ENST00000510918 627 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 APOOP3-201ENST00000536787 586 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC025423.5-201ENST00000550230 219 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 MIR5692A1-201ENST00000580523 69 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC023043.2-201ENST00000589678 1026 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC024220.1-201ENST00000603675 484 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC002044.1-201ENST00000606707 158 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AL355810.1-201ENST00000614629 552 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 FAM157A-202ENST00000615155 405 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 Z83843.1-201ENST00000604070 3685 ntBASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 AC058791.1-201ENST00000608412 3198 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AL513302.2-201ENST00000562313 1842 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 SNORA63.1-201ENST00000362493 131 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RNU6-600P-201ENST00000362524 99 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RNU6-562P-201ENST00000362731 107 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.162-201ENST00000363683 102 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.326-201ENST00000365176 113 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 MIR578-201ENST00000384828 96 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 EI24P1-201ENST00000416584 867 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RPL27AP8-201ENST00000424277 446 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AL590632.1-201ENST00000424289 371 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 TXNP1-201ENST00000441872 371 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RPL32P28-201ENST00000443577 397 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RPL30P15-201ENST00000457129 321 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 RPL31P60-201ENST00000478450 367 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC023141.12-201ENST00000512399 199 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 APOOP4-201ENST00000513530 597 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 MIR548AC-201ENST00000585049 88 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC098826.3-201ENST00000603823 466 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC005034.5-201ENST00000604219 466 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AL138726.1-201ENST00000614873 333 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 MIR6128-201ENST00000615528 109 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 MTND4P27-201ENST00000450813 1354 ntBASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC178Q5BJE1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC138393.1-203ENST00000327086 343 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 RNU6-601P-201ENST00000384540 107 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 Z99755.1-201ENST00000414048 380 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 RPL7P10-201ENST00000417407 739 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 FABP5P14-201ENST00000437273 393 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 SUMO2P6-201ENST00000505273 288 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 MTND3P25-201ENST00000509243 135 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC005741.1-201ENST00000511094 432 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 RNU6-1069P-201ENST00000516612 133 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AC107934.2-201ENST00000518653 310 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC178Q5BJE1 TGIF1P1-201ENST00000558095 802 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms