Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 NACAP2-201ENST00000318548 624 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 OR56A5-201ENST00000340110 738 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 RNU6-660P-201ENST00000364566 109 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 RNU6-817P-201ENST00000391083 104 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 CIR1P3-201ENST00000405137 479 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AL353729.1-201ENST00000425044 720 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC104651.1-201ENST00000427559 735 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 SRIP2-201ENST00000428470 166 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 RPL36AP53-201ENST00000432891 316 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 FABP5P13-201ENST00000452144 328 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC007182.2-201ENST00000489251 402 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC139453.3-201ENST00000493276 369 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC123904.2-201ENST00000548059 300 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC006199.1-201ENST00000548728 219 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AL133241.1-201ENST00000556832 487 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 MIR3945-201ENST00000581853 98 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 APOOP1-201ENST00000604695 592 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC007363.1-201ENST00000604736 620 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AP000240.1-201ENST00000609910 452 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC103710.2-201ENST00000609912 942 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC087241.4-201ENST00000612441 480 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
PTPN20Q4JDL3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 HSPE1P11-201ENST00000339579 310 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 RNU6-701P-201ENST00000384059 107 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 U8.14-201ENST00000390843 143 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC098592.1-201ENST00000419352 333 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 HMGB3P12-201ENST00000438745 556 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 GPM6BP3-201ENST00000442797 145 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 MTND4P2-201ENST00000507767 1203 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 SNORA31.25-201ENST00000517242 134 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC084851.1-201ENST00000529105 249 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC091152.3-201ENST00000604227 325 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC009318.2-201ENST00000610917 651 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC090970.3-201ENST00000612566 866 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AP001486.3-201ENST00000615334 372 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AL162373.1-201ENST00000620433 407 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AL391262.2-201ENST00000622466 494 ntBASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PTPN20Q4JDL3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RNY3P13-201ENST00000365542 102 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 Z98749.2-208ENST00000381646 500 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 SNORA46.1-201ENST00000391069 153 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RNA5SP270-201ENST00000411361 118 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RPS27AP14-201ENST00000422868 454 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 AL354941.1-201ENST00000438600 464 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RN7SL429P-201ENST00000479090 223 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RN7SL489P-201ENST00000486185 223 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RN7SL327P-201ENST00000488659 223 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 RPL39P36-201ENST00000490784 156 ntBASIC1.97□□□□□ -2.09
PTPN20Q4JDL3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms