Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN3Q15651 AP001324.2-201ENST00000461163 319 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AC015724.1-201ENST00000478577 156 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.44□□□□□ -2.34
HMGN3Q15651 SCARNA15.2-201ENST00000516409 127 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 SNORA31.22-201ENST00000517204 135 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AC019176.1-201ENST00000518519 225 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 LINC00557-201ENST00000563184 1279 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.44□□□□□ -2.34
HMGN3Q15651 AC008088.1-201ENST00000580993 280 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 MTATP6P3-201ENST00000581686 676 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 FAM106DP-201ENST00000586416 501 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AC005261.5-201ENST00000596280 355 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 AC136443.5-201ENST00000603741 370 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 uc_338.14-201ENST00000613162 166 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.44□□□□□ -2.34
HMGN3Q15651 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HMGN3Q15651 SNORD51-201ENST00000384320 80 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 MIR520E-201ENST00000384867 87 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
HMGN3Q15651 MIR888-201ENST00000401186 77 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AL139098.1-201ENST00000407291 389 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN3Q15651 CST2P1-201ENST00000425770 87 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN3Q15651 PGBD4P5-201ENST00000445958 426 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN3Q15651 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN3Q15651 RAP1BP2-201ENST00000478270 544 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC108729.1-201ENST00000487812 947 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
HMGN3Q15651 SNORA48.9-201ENST00000516419 162 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 SNORD116-30-201ENST00000516468 85 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 NRON-201ENST00000517270 370 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC136628.3-201ENST00000521868 290 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 CYCSP27-201ENST00000527643 293 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN3Q15651 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.43□□□□□ -2.34
HMGN3Q15651 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN3Q15651 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.43□□□□□ -2.34
HMGN3Q15651 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.43□□□□□ -2.34
HMGN3Q15651 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN3Q15651 CYP3A52P-201ENST00000563326 91 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.43□□□□□ -2.34
HMGN3Q15651 BNIP3P27-201ENST00000599991 412 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AL671309.1-201ENST00000603750 544 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 FTX_3.1-201ENST00000610451 147 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC083806.3-201ENST00000614016 455 ntBASIC0.43□□□□□ -2.34
HMGN3Q15651 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.43□□□□□ -2.34
HMGN3Q15651 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN3Q15651 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN3Q15651 RNU1-124P-201ENST00000363861 145 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 SNORD1A-201ENST00000364968 72 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 MIR95-201ENST00000385072 81 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 ATP5F1P6-201ENST00000402768 767 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 MIR1276-201ENST00000408707 83 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 AC083875.1-201ENST00000419509 405 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 RPP40P1-201ENST00000426762 456 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN3Q15651 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN3Q15651 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.42□□□□□ -2.34
HMGN3Q15651 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.42□□□□□ -2.34
HMGN3Q15651 RAB11AP2-201ENST00000545905 639 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 CYP4A27P-201ENST00000567218 190 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 ELOCP5-201ENST00000604924 333 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN3Q15651 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGN3Q15651 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HMGN3Q15651 Z75746.1-201ENST00000440243 2080 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 MTND5P31-201ENST00000419366 1374 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 AC110491.1-201ENST00000562191 2010 ntBASIC0.42□□□□□ -2.34
HMGN3Q15651 AL138713.1-201ENST00000624026 2130 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 NACAP2-201ENST00000318548 624 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 RNU6-968P-201ENST00000384076 107 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 RNU6-1151P-201ENST00000384684 107 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN3Q15651 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.41□□□□□ -2.34
HMGN3Q15651 AC007919.1-201ENST00000429380 217 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 RPL7P34-201ENST00000433316 712 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN3Q15651 SNRPEP7-201ENST00000438350 220 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 MTCO1P44-201ENST00000441935 243 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 AL035666.1-201ENST00000446195 348 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 KATNBL1P6-201ENST00000453433 915 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 MTND2P24-201ENST00000453434 806 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 SNRPFP3-201ENST00000457792 225 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 RPS27AP10-201ENST00000496103 208 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 AC093767.1-201ENST00000504523 156 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 SNORA31.17-201ENST00000516953 127 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 RNU6-667P-201ENST00000517186 102 ntBASIC0.41□□□□□ -2.34
HMGN3Q15651 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.41□□□□□ -2.34
HMGN3Q15651 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.41□□□□□ -2.34
HMGN3Q15651 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms