Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.12□□□□□ -1.91
LTBQ06643 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.12□□□□□ -1.91
LTBQ06643 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.12□□□□□ -1.91
LTBQ06643 AC107399.1-201ENST00000451226 265 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.12□□□□□ -1.91
LTBQ06643 RPS4XP2-201ENST00000458402 793 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC008155.2-201ENST00000464337 397 ntBASIC3.12□□□□□ -1.91
LTBQ06643 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 MTND5P5-201ENST00000503764 376 ntBASIC3.12□□□□□ -1.91
LTBQ06643 HMGB1P22-201ENST00000505315 124 ntBASIC3.12□□□□□ -1.91
LTBQ06643 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.12□□□□□ -1.91
LTBQ06643 RN7SKP24-201ENST00000515888 284 ntBASIC3.12□□□□□ -1.91
LTBQ06643 RNU6-189P-201ENST00000516120 101 ntBASIC3.12□□□□□ -1.91
LTBQ06643 SNORA70.14-201ENST00000516205 110 ntBASIC3.12□□□□□ -1.91
LTBQ06643 Y_RNA.689-201ENST00000516589 107 ntBASIC3.12□□□□□ -1.91
LTBQ06643 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
LTBQ06643 SNORA31.22-201ENST00000517204 135 ntBASIC3.12□□□□□ -1.91
LTBQ06643 COPS8P3-201ENST00000526024 482 ntBASIC3.12□□□□□ -1.91
LTBQ06643 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.12□□□□□ -1.91
LTBQ06643 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
LTBQ06643 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
LTBQ06643 AL163153.1-201ENST00000554223 283 ntBASIC3.12□□□□□ -1.91
LTBQ06643 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.12□□□□□ -1.91
LTBQ06643 ZNF192P1-203ENST00000565888 810 ntBASIC3.12□□□□□ -1.91
LTBQ06643 SNRPGP17-201ENST00000603780 214 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC136601.2-201ENST00000604356 474 ntBASIC3.12□□□□□ -1.91
LTBQ06643 ATP1B3P1-201ENST00000605365 821 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AL158032.1-201ENST00000605401 106 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC080078.3-201ENST00000605407 463 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AL080274.1-201ENST00000605565 220 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.12□□□□□ -1.91
LTBQ06643 AC009570.1-201ENST00000609599 745 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AL353748.2-201ENST00000622148 471 ntBASIC3.12□□□□□ -1.91
LTBQ06643 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 AL365440.1-201ENST00000436135 2167 ntBASIC3.12□□□□□ -1.91
LTBQ06643 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 AL513302.2-201ENST00000562313 1842 ntBASIC3.12□□□□□ -1.91
LTBQ06643 AL137003.2-201ENST00000606924 2538 ntBASIC3.12□□□□□ -1.91
LTBQ06643 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LTBQ06643 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LTBQ06643 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
LTBQ06643 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LTBQ06643 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.11□□□□□ -1.91
LTBQ06643 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LTBQ06643 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.11□□□□□ -1.91
LTBQ06643 RNA5SP126-201ENST00000365092 109 ntBASIC3.11□□□□□ -1.91
LTBQ06643 SNORA4.3-201ENST00000365564 137 ntBASIC3.11□□□□□ -1.91
LTBQ06643 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBQ06643 MIR606-201ENST00000384851 96 ntBASIC3.11□□□□□ -1.91
LTBQ06643 RPL37P10-201ENST00000412884 288 ntBASIC3.11□□□□□ -1.91
LTBQ06643 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBQ06643 RPS15AP6-201ENST00000420703 385 ntBASIC3.11□□□□□ -1.91
LTBQ06643 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
LTBQ06643 AC005300.1-201ENST00000428401 373 ntBASIC3.11□□□□□ -1.91
LTBQ06643 GPM6BP2-201ENST00000432046 144 ntBASIC3.11□□□□□ -1.91
LTBQ06643 FABP5P14-201ENST00000437273 393 ntBASIC3.11□□□□□ -1.91
LTBQ06643 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBQ06643 NEFMP1-201ENST00000443423 1006 ntBASIC3.11□□□□□ -1.91
LTBQ06643 GPM6BP1-201ENST00000446387 144 ntBASIC3.11□□□□□ -1.91
LTBQ06643 RPS24P6-201ENST00000452670 400 ntBASIC3.11□□□□□ -1.91
LTBQ06643 DYNLL1P5-201ENST00000467158 270 ntBASIC3.11□□□□□ -1.91
LTBQ06643 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBQ06643 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBQ06643 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.11□□□□□ -1.91
LTBQ06643 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.11□□□□□ -1.91
LTBQ06643 RNU6-1045P-201ENST00000516321 107 ntBASIC3.11□□□□□ -1.91
LTBQ06643 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
LTBQ06643 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.11□□□□□ -1.91
LTBQ06643 MIR4790-201ENST00000577799 79 ntBASIC3.11□□□□□ -1.91
LTBQ06643 MIR4325-201ENST00000583049 90 ntBASIC3.11□□□□□ -1.91
LTBQ06643 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LTBQ06643 AC022893.3-201ENST00000607665 437 ntBASIC3.11□□□□□ -1.91
LTBQ06643 AC040896.1-201ENST00000613819 479 ntBASIC3.11□□□□□ -1.91
LTBQ06643 FAM157A-202ENST00000615155 405 ntBASIC3.11□□□□□ -1.91
LTBQ06643 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LTBQ06643 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LTBQ06643 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LTBQ06643 HSPA8P4-201ENST00000511877 1920 ntBASIC3.11□□□□□ -1.91
LTBQ06643 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
LTBQ06643 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.1□□□□□ -1.91
LTBQ06643 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LTBQ06643 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LTBQ06643 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LTBQ06643 RNU1-75P-201ENST00000347264 129 ntBASIC3.1□□□□□ -1.91
LTBQ06643 Y_RNA.212-201ENST00000364177 102 ntBASIC3.1□□□□□ -1.91
LTBQ06643 SNORA63C-201ENST00000364578 129 ntBASIC3.1□□□□□ -1.91
LTBQ06643 SNORD6-201ENST00000365444 73 ntBASIC3.1□□□□□ -1.91
LTBQ06643 RNU6-738P-201ENST00000384531 106 ntBASIC3.1□□□□□ -1.91
LTBQ06643 SNORD17-201ENST00000390930 237 ntBASIC3.1□□□□□ -1.91
LTBQ06643 RNU6-882P-201ENST00000391025 103 ntBASIC3.1□□□□□ -1.91
LTBQ06643 CISD1P1-201ENST00000393907 327 ntBASIC3.1□□□□□ -1.91
LTBQ06643 AL139039.1-201ENST00000401900 692 ntBASIC3.1□□□□□ -1.91
LTBQ06643 RNU6-370P-201ENST00000411008 104 ntBASIC3.1□□□□□ -1.91
LTBQ06643 RNA5SP111-201ENST00000411386 101 ntBASIC3.1□□□□□ -1.91
LTBQ06643 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
LTBQ06643 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.1□□□□□ -1.91
LTBQ06643 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms