Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.84□□□□□ -1.63
PTPN12Q05209 AL160314.1-201ENST00000490836 438 ntBASIC4.84□□□□□ -1.63
PTPN12Q05209 SNORA74D-201ENST00000516404 141 ntBASIC4.84□□□□□ -1.63
PTPN12Q05209 SNORA40.14-201ENST00000516543 86 ntBASIC4.84□□□□□ -1.63
PTPN12Q05209 Y_RNA.687-201ENST00000516558 91 ntBASIC4.84□□□□□ -1.63
PTPN12Q05209 RNU6-1315P-201ENST00000517187 99 ntBASIC4.84□□□□□ -1.63
PTPN12Q05209 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTPN12Q05209 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.84□□□□□ -1.63
PTPN12Q05209 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN12Q05209 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN12Q05209 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.84□□□□□ -1.63
PTPN12Q05209 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.84□□□□□ -1.63
PTPN12Q05209 AL034408.1-202ENST00000636088 415 ntBASIC4.84□□□□□ -1.63
PTPN12Q05209 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN12Q05209 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN12Q05209 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN12Q05209 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
PTPN12Q05209 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.84□□□□□ -1.64
PTPN12Q05209 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTPN12Q05209 MTND5P27-201ENST00000428871 1720 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 Y_RNA.245-201ENST00000364493 95 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 RNU6-596P-201ENST00000365395 98 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 RNA5SP167-201ENST00000365461 116 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 RNU6-395P-201ENST00000365662 106 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 Y_RNA.552-201ENST00000384665 112 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AL138885.1-201ENST00000405921 675 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 SNORA57.3-201ENST00000411095 141 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AC007919.1-201ENST00000429380 217 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 HMGB1P37-201ENST00000439613 609 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 RPS3AP46-201ENST00000448352 682 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 HMGN2P13-201ENST00000476476 274 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 S100A11P1-201ENST00000477525 312 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN12Q05209 MIR892C-201ENST00000516410 77 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN12Q05209 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 TRAV32-201ENST00000553993 340 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.83□□□□□ -1.64
PTPN12Q05209 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.83□□□□□ -1.64
PTPN12Q05209 AC123912.5-201ENST00000605470 343 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 MIR1244-1-201ENST00000612829 85 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AL391261.4-201ENST00000616012 481 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN12Q05209 AC103858.2-201ENST00000621471 543 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.83□□□□□ -1.64
PTPN12Q05209 MIR1244-3-201ENST00000635744 85 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 MIR1244-2-201ENST00000636449 85 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 MIR1244-4-202ENST00000636813 85 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN12Q05209 NCAPGP1-201ENST00000505112 1814 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN12Q05209 ZNF962P-201ENST00000443465 3140 ntBASIC4.83□□□□□ -1.64
PTPN12Q05209 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN12Q05209 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN12Q05209 SNORA51.11-201ENST00000384442 131 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 MIR513A2-201ENST00000385249 127 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN12Q05209 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN12Q05209 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN12Q05209 AC073587.1-201ENST00000447093 876 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN12Q05209 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN12Q05209 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN12Q05209 AC078918.1-201ENST00000498515 228 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 RNU1-86P-201ENST00000516108 154 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 RNU2-53P-201ENST00000516257 147 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 RNU1-107P-201ENST00000516617 154 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 RNA5SP290-201ENST00000517133 127 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.82□□□□□ -1.64
PTPN12Q05209 HSPE1P20-201ENST00000538133 289 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN12Q05209 AL157871.3-201ENST00000557231 293 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 MIR1273C-201ENST00000578669 77 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 AC032011.1-201ENST00000611703 1549 ntBASIC4.82□□□□□ -1.64
PTPN12Q05209 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTPN12Q05209 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN12Q05209 Y_RNA.33-201ENST00000362591 102 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 Y_RNA.222-201ENST00000364264 102 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 SNORA5A-201ENST00000384111 134 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 MIR521-1-201ENST00000384902 87 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 MIR34B-201ENST00000385076 84 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 MIR199A2-201ENST00000385289 110 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 RPL21P1-201ENST00000399532 476 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN12Q05209 AC092423.1-201ENST00000430165 186 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 AC011742.1-201ENST00000431448 434 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 AC133134.1-201ENST00000466800 359 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 AC078817.1-201ENST00000492623 435 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 AC022493.1-201ENST00000492984 337 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN12Q05209 AC023141.12-201ENST00000512399 199 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 RNU6-408P-201ENST00000515910 100 ntBASIC4.81□□□□□ -1.64
PTPN12Q05209 SNORA40.15-201ENST00000516884 107 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms