Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC007389.2-201ENST00000434630 306 ntBASIC3.25□□□□□ -1.89
RAE1P78406 RPS3AP52-201ENST00000435639 297 ntBASIC3.25□□□□□ -1.89
RAE1P78406 RNA5SP310-201ENST00000459084 116 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC104472.2-201ENST00000469035 601 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.25□□□□□ -1.89
RAE1P78406 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.25□□□□□ -1.89
RAE1P78406 AP005597.4-201ENST00000526762 229 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC025423.5-201ENST00000550230 219 ntBASIC3.25□□□□□ -1.89
RAE1P78406 IMMP1LP2-201ENST00000552954 492 ntBASIC3.25□□□□□ -1.89
RAE1P78406 HMGB1P14-201ENST00000557424 591 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AMZ2P1-203ENST00000565833 850 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC006130.2-201ENST00000586202 326 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC044792.1-201ENST00000593294 196 ntBASIC3.25□□□□□ -1.89
RAE1P78406 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AL645944.1-201ENST00000603857 493 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AL355598.1-201ENST00000604169 202 ntBASIC3.25□□□□□ -1.89
RAE1P78406 APOOP1-201ENST00000604695 592 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC016727.1-205ENST00000605437 569 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.25□□□□□ -1.89
RAE1P78406 AL355365.1-201ENST00000616480 294 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AL160413.1-201ENST00000622780 310 ntBASIC3.25□□□□□ -1.89
RAE1P78406 AC012442.3-202ENST00000636742 206 ntBASIC3.25□□□□□ -1.89
RAE1P78406 FAM35BP-202ENST00000497389 3337 ntBASIC3.25□□□□□ -1.89
RAE1P78406 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
RAE1P78406 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.25□□□□□ -1.89
RAE1P78406 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAE1P78406 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.25□□□□□ -1.89
RAE1P78406 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAE1P78406 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAE1P78406 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.24□□□□□ -1.89
RAE1P78406 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAE1P78406 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAE1P78406 AC138393.1-203ENST00000327086 343 ntBASIC3.24□□□□□ -1.89
RAE1P78406 SNORA73.2-201ENST00000364946 201 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNU6-214P-201ENST00000384130 107 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNU6-166P-201ENST00000384371 107 ntBASIC3.24□□□□□ -1.89
RAE1P78406 SNORA1.3-201ENST00000384676 136 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RPS4XP3-201ENST00000398541 413 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNU6ATAC-201ENST00000408749 126 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNA5SP31-201ENST00000411144 127 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AL356968.1-201ENST00000416622 474 ntBASIC3.24□□□□□ -1.89
RAE1P78406 SKA2P1-201ENST00000425592 390 ntBASIC3.24□□□□□ -1.89
RAE1P78406 SAR1AP4-201ENST00000429225 591 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AC236972.2-201ENST00000434979 310 ntBASIC3.24□□□□□ -1.89
RAE1P78406 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AL078601.1-201ENST00000444542 271 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RPL12P25-201ENST00000455592 494 ntBASIC3.24□□□□□ -1.89
RAE1P78406 SNORD19B-201ENST00000459623 84 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RN7SL542P-201ENST00000467147 294 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RPL7P47-201ENST00000497299 556 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.24□□□□□ -1.89
RAE1P78406 RNU6-559P-201ENST00000516151 98 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNU6-572P-201ENST00000516724 80 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNU6-1231P-201ENST00000517185 103 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.24□□□□□ -1.89
RAE1P78406 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AC107934.2-201ENST00000518653 310 ntBASIC3.24□□□□□ -1.89
RAE1P78406 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.24□□□□□ -1.89
RAE1P78406 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.24□□□□□ -1.89
RAE1P78406 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
RAE1P78406 MIR4644-201ENST00000579929 84 ntBASIC3.24□□□□□ -1.89
RAE1P78406 RNU6-85P-201ENST00000605989 107 ntBASIC3.24□□□□□ -1.89
RAE1P78406 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.24□□□□□ -1.89
RAE1P78406 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.24□□□□□ -1.89
RAE1P78406 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RAE1P78406 U2.21-201ENST00000637295 81 ntBASIC3.24□□□□□ -1.89
RAE1P78406 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAE1P78406 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RAE1P78406 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RAE1P78406 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 AL161912.2-201ENST00000565707 3007 ntBASIC3.23□□□□□ -1.89
RAE1P78406 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RAE1P78406 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
RAE1P78406 RNU6-1035P-201ENST00000384477 107 ntBASIC3.23□□□□□ -1.89
RAE1P78406 RNU6-1011P-201ENST00000384668 107 ntBASIC3.23□□□□□ -1.89
RAE1P78406 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 RN7SKP111-201ENST00000410349 271 ntBASIC3.23□□□□□ -1.89
RAE1P78406 RNU4-14P-201ENST00000410858 122 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AC126124.2-201ENST00000413542 321 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.23□□□□□ -1.89
RAE1P78406 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 FABP5P14-201ENST00000437273 393 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AL133547.1-201ENST00000448546 220 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
RAE1P78406 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.23□□□□□ -1.89
RAE1P78406 AC092798.1-201ENST00000458542 409 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AC130509.1-201ENST00000464158 433 ntBASIC3.23□□□□□ -1.89
RAE1P78406 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.23□□□□□ -1.89
RAE1P78406 RPS27P27-201ENST00000498779 255 ntBASIC3.23□□□□□ -1.89
RAE1P78406 RN7SKP24-201ENST00000515888 284 ntBASIC3.23□□□□□ -1.89
RAE1P78406 RNU6-703P-201ENST00000516946 107 ntBASIC3.23□□□□□ -1.89
RAE1P78406 RNU1-45P-201ENST00000517191 141 ntBASIC3.23□□□□□ -1.89
RAE1P78406 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RAE1P78406 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.23□□□□□ -1.89
RAE1P78406 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms