Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP46P62068 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP46P62068 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.25□□□□□ -1.57
USP46P62068 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP46P62068 MIR1271-201ENST00000408537 86 ntBASIC5.25□□□□□ -1.57
USP46P62068 FTH1P6-201ENST00000430768 320 ntBASIC5.25□□□□□ -1.57
USP46P62068 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.25□□□□□ -1.57
USP46P62068 AC112220.1-201ENST00000434628 355 ntBASIC5.25□□□□□ -1.57
USP46P62068 CR769767.1-201ENST00000436337 346 ntBASIC5.25□□□□□ -1.57
USP46P62068 AC006466.1-201ENST00000438721 289 ntBASIC5.25□□□□□ -1.57
USP46P62068 RPS20P10-201ENST00000451209 253 ntBASIC5.25□□□□□ -1.57
USP46P62068 AC011276.1-201ENST00000469688 323 ntBASIC5.25□□□□□ -1.57
USP46P62068 AL671862.1-201ENST00000515851 349 ntBASIC5.25□□□□□ -1.57
USP46P62068 Y_RNA.797-201ENST00000515977 94 ntBASIC5.25□□□□□ -1.57
USP46P62068 RNA5SP464-201ENST00000516251 108 ntBASIC5.25□□□□□ -1.57
USP46P62068 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
USP46P62068 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
USP46P62068 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP46P62068 CUL1P1-201ENST00000509510 2425 ntBASIC5.25□□□□□ -1.57
USP46P62068 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP46P62068 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.25□□□□□ -1.57
USP46P62068 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP46P62068 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP46P62068 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
USP46P62068 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP46P62068 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP46P62068 Y_RNA.179-201ENST00000363844 90 ntBASIC5.24□□□□□ -1.57
USP46P62068 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USP46P62068 RNU6-239P-201ENST00000390990 99 ntBASIC5.24□□□□□ -1.57
USP46P62068 FAR2P2-201ENST00000413041 594 ntBASIC5.24□□□□□ -1.57
USP46P62068 AC074117.2-201ENST00000417130 397 ntBASIC5.24□□□□□ -1.57
USP46P62068 RAB28P5-201ENST00000427490 651 ntBASIC5.24□□□□□ -1.57
USP46P62068 AC007969.2-201ENST00000441891 191 ntBASIC5.24□□□□□ -1.57
USP46P62068 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.24□□□□□ -1.57
USP46P62068 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.24□□□□□ -1.57
USP46P62068 RNU6-1333P-201ENST00000516162 93 ntBASIC5.24□□□□□ -1.57
USP46P62068 SNORA25.12-201ENST00000516202 82 ntBASIC5.24□□□□□ -1.57
USP46P62068 RNA5SP392-201ENST00000516905 112 ntBASIC5.24□□□□□ -1.57
USP46P62068 RNU6-971P-201ENST00000516920 106 ntBASIC5.24□□□□□ -1.57
USP46P62068 RNA5SP54-201ENST00000516951 92 ntBASIC5.24□□□□□ -1.57
USP46P62068 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.24□□□□□ -1.57
USP46P62068 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.24□□□□□ -1.57
USP46P62068 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.24□□□□□ -1.57
USP46P62068 AL359198.2-201ENST00000611836 194 ntBASIC5.24□□□□□ -1.57
USP46P62068 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP46P62068 MAPK10-304ENST00000641341 3984 ntBASIC5.24□□□□□ -1.57
USP46P62068 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.24□□□□□ -1.57
USP46P62068 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
USP46P62068 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.24□□□□□ -1.57
USP46P62068 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.24□□□□□ -1.57
USP46P62068 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.23□□□□□ -1.57
USP46P62068 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP46P62068 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP46P62068 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP46P62068 AC126323.6-202ENST00000568092 3511 ntBASIC5.23□□□□□ -1.57
USP46P62068 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.23□□□□□ -1.57
USP46P62068 AL592437.2-201ENST00000421655 2434 ntBASIC5.23□□□□□ -1.57
USP46P62068 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP46P62068 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.23□□□□□ -1.57
USP46P62068 RNA5SP191-201ENST00000362585 102 ntBASIC5.23□□□□□ -1.57
USP46P62068 RNU5F-3P-201ENST00000363767 117 ntBASIC5.23□□□□□ -1.57
USP46P62068 RNA5SP87-201ENST00000384155 118 ntBASIC5.23□□□□□ -1.57
USP46P62068 COX6CP13-201ENST00000428703 226 ntBASIC5.23□□□□□ -1.57
USP46P62068 AL450023.3-201ENST00000440592 271 ntBASIC5.23□□□□□ -1.57
USP46P62068 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.23□□□□□ -1.57
USP46P62068 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.23□□□□□ -1.57
USP46P62068 RPS23P1-201ENST00000491662 432 ntBASIC5.23□□□□□ -1.57
USP46P62068 RNU6-919P-201ENST00000516731 104 ntBASIC5.23□□□□□ -1.57
USP46P62068 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.23□□□□□ -1.57
USP46P62068 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP46P62068 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.23□□□□□ -1.57
USP46P62068 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.23□□□□□ -1.57
USP46P62068 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.23□□□□□ -1.57
USP46P62068 SRP72P2-201ENST00000344851 1979 ntBASIC5.23□□□□□ -1.57
USP46P62068 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
USP46P62068 AL138820.1-201ENST00000617901 5305 ntBASIC5.22□□□□□ -1.57
USP46P62068 SCARNA15-201ENST00000607520 4325 ntBASIC5.22□□□□□ -1.57
USP46P62068 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.22□□□□□ -1.57
USP46P62068 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP46P62068 AC118273.1-201ENST00000525324 3006 ntBASIC5.22□□□□□ -1.57
USP46P62068 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.22□□□□□ -1.57
USP46P62068 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.22□□□□□ -1.57
USP46P62068 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
USP46P62068 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP46P62068 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
USP46P62068 RNU6-1248P-201ENST00000391096 64 ntBASIC5.22□□□□□ -1.57
USP46P62068 AL691482.1-201ENST00000453255 87 ntBASIC5.22□□□□□ -1.57
USP46P62068 MTATP6P7-201ENST00000453315 681 ntBASIC5.22□□□□□ -1.57
USP46P62068 AC020890.1-201ENST00000491837 504 ntBASIC5.22□□□□□ -1.57
USP46P62068 RN7SL441P-201ENST00000492388 296 ntBASIC5.22□□□□□ -1.57
USP46P62068 CYCSP23-201ENST00000519781 313 ntBASIC5.22□□□□□ -1.57
USP46P62068 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP46P62068 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.22□□□□□ -1.57
USP46P62068 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.22□□□□□ -1.57
USP46P62068 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP46P62068 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP46P62068 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP46P62068 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.22□□□□□ -1.57
USP46P62068 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
USP46P62068 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms