Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GFRA1P56159 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
GFRA1P56159 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
GFRA1P56159 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.89□□□□□ -1.79
GFRA1P56159 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.89□□□□□ -1.79
GFRA1P56159 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.88□□□□□ -1.79
GFRA1P56159 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
GFRA1P56159 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.88□□□□□ -1.79
GFRA1P56159 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
GFRA1P56159 RNU1-14P-201ENST00000362759 152 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 RNU6-942P-201ENST00000363002 107 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 Y_RNA.551-201ENST00000384661 102 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 SNORA1.3-201ENST00000384676 136 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 MIR195-201ENST00000385194 87 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 RPS4XP3-201ENST00000398541 413 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 AL591034.1-201ENST00000407447 340 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 Y_RNA.592-201ENST00000410274 109 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.88□□□□□ -1.79
GFRA1P56159 RPL23AP81-201ENST00000455252 467 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.88□□□□□ -1.79
GFRA1P56159 RPL7AP28-201ENST00000464513 571 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.88□□□□□ -1.79
GFRA1P56159 RPS27AP10-201ENST00000496103 208 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 RNA5SP73-201ENST00000516744 108 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
GFRA1P56159 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.88□□□□□ -1.79
GFRA1P56159 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.88□□□□□ -1.79
GFRA1P56159 AC006077.1-201ENST00000604746 343 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.88□□□□□ -1.79
GFRA1P56159 AC097372.5-201ENST00000623665 376 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 AC241585.2-209ENST00000638217 143 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GFRA1P56159 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GFRA1P56159 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.88□□□□□ -1.79
GFRA1P56159 AC018529.3-201ENST00000624212 2254 ntBASIC3.88□□□□□ -1.79
GFRA1P56159 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GFRA1P56159 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GFRA1P56159 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
GFRA1P56159 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
GFRA1P56159 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
GFRA1P56159 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.87□□□□□ -1.79
GFRA1P56159 MIR383-201ENST00000362257 73 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 RNU1-100P-201ENST00000365255 165 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 RNA5SP22-201ENST00000365393 109 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 SNORD116-20-201ENST00000384529 92 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 MT-TG-201ENST00000387429 68 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 SNORA12.2-201ENST00000391040 156 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 MIR1911-201ENST00000410783 80 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 RAB9AP3-201ENST00000412737 573 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.87□□□□□ -1.79
GFRA1P56159 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.87□□□□□ -1.79
GFRA1P56159 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.87□□□□□ -1.79
GFRA1P56159 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.87□□□□□ -1.79
GFRA1P56159 RAB9AP1-201ENST00000449393 573 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AL513124.1-201ENST00000450410 614 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 MTND4LP22-201ENST00000508209 276 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AC108043.1-201ENST00000512696 574 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 RNU7-175P-201ENST00000515915 61 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 Y_RNA.706-201ENST00000516933 99 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.87□□□□□ -1.79
GFRA1P56159 HIGD1AP1-201ENST00000550979 275 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 RPL21P7-201ENST00000557463 483 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AC104581.2-201ENST00000572227 430 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 MIR3609-201ENST00000582661 80 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AL390123.1-201ENST00000603216 237 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AC024581.2-201ENST00000619986 252 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AC243829.7-201ENST00000633081 225 ntBASIC3.87□□□□□ -1.79
GFRA1P56159 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.87□□□□□ -1.79
GFRA1P56159 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.87□□□□□ -1.79
GFRA1P56159 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
GFRA1P56159 AF117829.1-206ENST00000621883 3802 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 AC139713.2-215ENST00000641428 5037 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 AC233981.2-201ENST00000611524 1614 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 Y_RNA.188-201ENST00000363952 111 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 Y_RNA.276-201ENST00000364732 109 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GFRA1P56159 MIR190B-201ENST00000401119 79 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 RNA5SP36-201ENST00000410197 133 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 RNA5SP146-201ENST00000410743 123 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 AC099548.1-201ENST00000421443 426 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 MTCO3P29-201ENST00000432119 779 ntBASIC3.86□□□□□ -1.79
GFRA1P56159 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms