Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDH13P55290 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CDH13P55290 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH13P55290 AC092593.1-201ENST00000515413 1815 ntBASIC2.78□□□□□ -1.96
CDH13P55290 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH13P55290 RNU4-75P-201ENST00000364621 146 ntBASIC2.78□□□□□ -1.96
CDH13P55290 SNORD21-201ENST00000383953 95 ntBASIC2.78□□□□□ -1.96
CDH13P55290 Y_RNA.517-201ENST00000384551 106 ntBASIC2.78□□□□□ -1.96
CDH13P55290 Y_RNA.623-201ENST00000411128 95 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH13P55290 TIMM9P3-201ENST00000428659 274 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH13P55290 AL627311.1-201ENST00000431514 115 ntBASIC2.78□□□□□ -1.96
CDH13P55290 RPL39P40-201ENST00000445481 146 ntBASIC2.78□□□□□ -1.96
CDH13P55290 NIPA2P5-201ENST00000452282 464 ntBASIC2.78□□□□□ -1.96
CDH13P55290 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.78□□□□□ -1.96
CDH13P55290 AC006512.1-201ENST00000468816 291 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH13P55290 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.78□□□□□ -1.96
CDH13P55290 AC104136.1-201ENST00000512969 394 ntBASIC2.78□□□□□ -1.96
CDH13P55290 SCGB1D5P-201ENST00000515134 247 ntBASIC2.78□□□□□ -1.96
CDH13P55290 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.78□□□□□ -1.96
CDH13P55290 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
CDH13P55290 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH13P55290 DEFB131E-202ENST00000602581 683 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AC078795.2-201ENST00000602835 1252 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AL391813.1-201ENST00000603098 260 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AC007179.3-201ENST00000604976 235 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AC087045.1-201ENST00000605856 382 ntBASIC2.78□□□□□ -1.96
CDH13P55290 AC124864.2-201ENST00000624736 186 ntBASIC2.78□□□□□ -1.96
CDH13P55290 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH13P55290 AC138915.1-201ENST00000565427 1685 ntBASIC2.78□□□□□ -1.96
CDH13P55290 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
CDH13P55290 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH13P55290 AC009487.2-201ENST00000420969 6821 ntBASIC2.77□□□□□ -1.97
CDH13P55290 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH13P55290 RNU6-116P-201ENST00000384042 109 ntBASIC2.77□□□□□ -1.97
CDH13P55290 Y_RNA.481-201ENST00000384373 102 ntBASIC2.77□□□□□ -1.97
CDH13P55290 MIR578-201ENST00000384828 96 ntBASIC2.77□□□□□ -1.97
CDH13P55290 MIR518D-201ENST00000385014 87 ntBASIC2.77□□□□□ -1.97
CDH13P55290 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH13P55290 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH13P55290 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AC022018.1-201ENST00000430685 241 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AL161651.1-201ENST00000440882 223 ntBASIC2.77□□□□□ -1.97
CDH13P55290 OSTCP8-201ENST00000445117 448 ntBASIC2.77□□□□□ -1.97
CDH13P55290 MTND1P1-201ENST00000445453 368 ntBASIC2.77□□□□□ -1.97
CDH13P55290 TPTE2P5-203ENST00000458118 728 ntBASIC2.77□□□□□ -1.97
CDH13P55290 RPS3AP14-201ENST00000483907 780 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AC011825.1-201ENST00000484967 388 ntBASIC2.77□□□□□ -1.97
CDH13P55290 HMGB1P30-201ENST00000492455 606 ntBASIC2.77□□□□□ -1.97
CDH13P55290 RPL9P6-201ENST00000492764 598 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AC091435.1-201ENST00000505442 584 ntBASIC2.77□□□□□ -1.97
CDH13P55290 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH13P55290 LRRC34P2-201ENST00000514850 553 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH13P55290 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH13P55290 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.77□□□□□ -1.97
CDH13P55290 AC011471.1-201ENST00000585766 187 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AP001330.5-201ENST00000607176 411 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AL158209.2-201ENST00000619266 216 ntBASIC2.77□□□□□ -1.97
CDH13P55290 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH13P55290 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CDH13P55290 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CDH13P55290 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDH13P55290 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CDH13P55290 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH13P55290 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH13P55290 RNU6-517P-201ENST00000384362 110 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH13P55290 AL353193.1-201ENST00000421444 268 ntBASIC2.76□□□□□ -1.97
CDH13P55290 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH13P55290 RPL7P37-201ENST00000425095 738 ntBASIC2.76□□□□□ -1.97
CDH13P55290 MTCO3P30-201ENST00000426425 670 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AC006946.1-201ENST00000429106 328 ntBASIC2.76□□□□□ -1.97
CDH13P55290 MTND3P21-201ENST00000433774 331 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AL360271.2-201ENST00000447710 161 ntBASIC2.76□□□□□ -1.97
CDH13P55290 PSPHP1-201ENST00000450062 261 ntBASIC2.76□□□□□ -1.97
CDH13P55290 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH13P55290 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH13P55290 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH13P55290 BTF3P15-201ENST00000455606 336 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AL583843.1-201ENST00000456070 346 ntBASIC2.76□□□□□ -1.97
CDH13P55290 RNU7-63P-201ENST00000459054 62 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AC092436.1-201ENST00000506450 503 ntBASIC2.76□□□□□ -1.97
CDH13P55290 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH13P55290 Y_RNA.655-201ENST00000515919 96 ntBASIC2.76□□□□□ -1.97
CDH13P55290 RN7SKP219-201ENST00000516825 296 ntBASIC2.76□□□□□ -1.97
CDH13P55290 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AP001893.2-201ENST00000526949 202 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AP005435.4-201ENST00000529514 284 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH13P55290 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH13P55290 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDH13P55290 GLYCAM1-201ENST00000546596 285 ntBASIC2.76□□□□□ -1.97
CDH13P55290 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH13P55290 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH13P55290 AC005046.1-201ENST00000608515 625 ntBASIC2.76□□□□□ -1.97
CDH13P55290 AC096577.2-201ENST00000611455 153 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms