Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.2□□□□□ -1.9
NR1H2P55055 AC073063.1-201ENST00000434352 607 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.2□□□□□ -1.9
NR1H2P55055 RPL21P23-201ENST00000446654 460 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 AC104058.1-201ENST00000448028 297 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 NDUFB1P2-201ENST00000449477 176 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 RN7SL75P-201ENST00000461926 281 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H2P55055 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H2P55055 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H2P55055 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.2□□□□□ -1.9
NR1H2P55055 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
NR1H2P55055 MIR4801-201ENST00000582704 82 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 MIR5195-201ENST00000583555 115 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 AC104458.1-201ENST00000608243 463 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 AC010338.1-201ENST00000621823 717 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 AL365361.1-201ENST00000566942 3481 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NR1H2P55055 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
NR1H2P55055 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NR1H2P55055 AC093010.3-201ENST00000570269 15214 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H2P55055 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H2P55055 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H2P55055 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NR1H2P55055 RNU6-877P-201ENST00000383868 107 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 SNORD37.1-201ENST00000390968 65 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AL139039.1-201ENST00000401900 692 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 RNU6-1068P-201ENST00000410958 103 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
NR1H2P55055 MTND1P2-201ENST00000430604 821 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H2P55055 RPL23AP58-201ENST00000440453 469 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H2P55055 OSTCP8-201ENST00000445117 448 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 WASF1P1-201ENST00000447560 1131 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.19□□□□□ -1.9
NR1H2P55055 NFU1P2-201ENST00000448700 469 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AC091179.1-201ENST00000461606 579 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.19□□□□□ -1.9
NR1H2P55055 HMGB1P30-201ENST00000492455 606 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.19□□□□□ -1.9
NR1H2P55055 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H2P55055 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H2P55055 HIF1AP1-201ENST00000553642 175 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AL133241.1-201ENST00000556832 487 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AC011471.1-201ENST00000585766 187 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H2P55055 AC020895.1-201ENST00000595362 272 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H2P55055 AC002553.4-201ENST00000616896 331 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H2P55055 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
NR1H2P55055 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H2P55055 AL354685.2-201ENST00000448218 1447 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
NR1H2P55055 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H2P55055 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H2P55055 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
NR1H2P55055 AL139276.1-201ENST00000311910 1001 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC009414.1-201ENST00000427200 443 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC093151.1-201ENST00000427711 313 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 ATP5JP1-201ENST00000431631 322 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 BTF3P15-201ENST00000455606 336 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 SNRPFP3-201ENST00000457792 225 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 RPL21P41-201ENST00000459863 264 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 RPL31P41-201ENST00000477967 372 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC079140.5-201ENST00000507882 310 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC008716.1-201ENST00000511084 513 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC104136.1-201ENST00000512969 394 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 SCARNA20.6-201ENST00000517251 106 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC234778.2-201ENST00000566241 354 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 AC106782.4-201ENST00000568264 210 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H2P55055 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NR1H2P55055 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
NR1H2P55055 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
NR1H2P55055 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NR1H2P55055 AC010889.1-201ENST00000566193 2666 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.17□□□□□ -1.9
NR1H2P55055 MTND4P14-201ENST00000435799 1354 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 RNY3P3-201ENST00000363816 102 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
NR1H2P55055 MIR34A-201ENST00000385130 110 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms