Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC116562.3-201ENST00000506136 177 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.85□□□□□ -1.95
LIMK1P53667 RNU6-123P-201ENST00000516163 102 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AC068587.5-201ENST00000528506 175 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.85□□□□□ -1.95
LIMK1P53667 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 AC068790.2-201ENST00000602601 557 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AC073648.5-201ENST00000603502 305 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AL670379.4-201ENST00000605279 254 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AL139286.2-201ENST00000606838 396 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AL359198.2-201ENST00000611836 194 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 AL449363.1-201ENST00000617815 186 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 U6.114-201ENST00000636407 96 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 MIR7515-201ENST00000637837 67 ntBASIC2.85□□□□□ -1.95
LIMK1P53667 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMK1P53667 ADAM3A-203ENST00000461344 2157 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LIMK1P53667 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.84□□□□□ -1.95
LIMK1P53667 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.84□□□□□ -1.95
LIMK1P53667 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
LIMK1P53667 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LIMK1P53667 AC108206.1-201ENST00000570186 4159 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 U8.2-201ENST00000363156 134 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LIMK1P53667 SNORA24.1-201ENST00000384401 135 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.84□□□□□ -1.95
LIMK1P53667 RPL26P27-201ENST00000414397 437 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AL109913.1-201ENST00000421173 514 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 ARL5AP4-201ENST00000430731 512 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AL358934.1-201ENST00000432346 324 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 RPL36AP6-201ENST00000435770 321 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.84□□□□□ -1.95
LIMK1P53667 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.84□□□□□ -1.95
LIMK1P53667 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.84□□□□□ -1.95
LIMK1P53667 AC008549.1-201ENST00000512900 643 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 SCARNA11.3-201ENST00000517276 130 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.84□□□□□ -1.95
LIMK1P53667 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.84□□□□□ -1.95
LIMK1P53667 AP001646.1-201ENST00000527936 915 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.84□□□□□ -1.95
LIMK1P53667 AC234778.2-201ENST00000566241 354 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.84□□□□□ -1.95
LIMK1P53667 AL391840.1-201ENST00000571144 367 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 AL121992.2-201ENST00000606262 256 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 MIR15A-201ENST00000607334 83 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
LIMK1P53667 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LIMK1P53667 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LIMK1P53667 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
LIMK1P53667 NACAP2-201ENST00000318548 624 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 Y_RNA.51-201ENST00000362725 102 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 RNU6-778P-201ENST00000363269 103 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 SNORA75-201ENST00000384158 137 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 RNU6-1042P-201ENST00000384204 107 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 RNU2-49P-201ENST00000410666 184 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 MTND3P17-201ENST00000416968 344 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.83□□□□□ -1.96
LIMK1P53667 SKA2P1-201ENST00000425592 390 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC007560.1-201ENST00000426912 237 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC133104.1-201ENST00000429100 218 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 HMGB1P9-201ENST00000429856 646 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 MTND4P32-201ENST00000437189 1237 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.83□□□□□ -1.96
LIMK1P53667 RPS3P1-201ENST00000456781 192 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 RPS27AP10-201ENST00000496103 208 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC117522.3-201ENST00000507974 584 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LIMK1P53667 AC010493.1-201ENST00000513479 292 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 RNU6-430P-201ENST00000517078 107 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC090572.1-201ENST00000519251 160 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.83□□□□□ -1.96
LIMK1P53667 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LIMK1P53667 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.83□□□□□ -1.96
LIMK1P53667 AL359212.1-201ENST00000556608 614 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AP005136.1-201ENST00000579765 429 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.83□□□□□ -1.96
LIMK1P53667 AL356280.1-201ENST00000603614 379 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC091834.1-201ENST00000614543 472 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC024940.5-201ENST00000622889 474 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AC025034.2-201ENST00000623264 286 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LIMK1P53667 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LIMK1P53667 ZNF658B-202ENST00000615961 3375 ntBASIC2.83□□□□□ -1.96
LIMK1P53667 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.82□□□□□ -1.96
LIMK1P53667 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIMK1P53667 Y_RNA.22-201ENST00000362492 102 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 RNU6-181P-201ENST00000363225 107 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 RNU6-1097P-201ENST00000363586 107 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LIMK1P53667 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LIMK1P53667 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LIMK1P53667 CISD1P1-201ENST00000393907 327 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 RNU6-1025P-201ENST00000410629 104 ntBASIC2.82□□□□□ -1.96
LIMK1P53667 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIMK1P53667 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms