Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 MIR559-201ENST00000385188 96 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 EIF4E2P1-201ENST00000393781 255 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 MIR450B-201ENST00000401182 78 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.18□□□□□ -1.9
PGGT1BP53609 RPS15AP6-201ENST00000420703 385 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 RPL27AP8-201ENST00000424277 446 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 MTCO1P39-201ENST00000426148 480 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AC005300.1-201ENST00000428401 373 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.18□□□□□ -1.9
PGGT1BP53609 AL159987.2-201ENST00000432754 307 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 HMGN2P7-201ENST00000456186 273 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.18□□□□□ -1.9
PGGT1BP53609 CEACAMP4-201ENST00000457676 421 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AC117503.1-201ENST00000472241 394 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.18□□□□□ -1.9
PGGT1BP53609 RPS27P27-201ENST00000498779 255 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 HMGB3P15-201ENST00000507326 574 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 HIGD1AP13-201ENST00000509878 289 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.18□□□□□ -1.9
PGGT1BP53609 RNU6-1170P-201ENST00000515974 106 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 SNORA31.8-201ENST00000516327 108 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PGGT1BP53609 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.18□□□□□ -1.9
PGGT1BP53609 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PGGT1BP53609 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.18□□□□□ -1.9
PGGT1BP53609 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.18□□□□□ -1.9
PGGT1BP53609 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.18□□□□□ -1.9
PGGT1BP53609 AC009570.1-201ENST00000609599 745 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 SDR42E1P2-201ENST00000614861 481 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 FAM157A-202ENST00000615155 405 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AC103705.1-201ENST00000619013 241 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 AC134503.1-201ENST00000633048 54 ntBASIC3.18□□□□□ -1.9
PGGT1BP53609 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PGGT1BP53609 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PGGT1BP53609 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PGGT1BP53609 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PGGT1BP53609 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PGGT1BP53609 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.17□□□□□ -1.9
PGGT1BP53609 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.17□□□□□ -1.9
PGGT1BP53609 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PGGT1BP53609 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PGGT1BP53609 RNU6-82P-201ENST00000363970 107 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RNU6-1303P-201ENST00000364841 107 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 SNORD6-201ENST00000365444 73 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RNU6-393P-201ENST00000384475 107 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PGGT1BP53609 AL357075.1-201ENST00000404107 726 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RPL5P18-201ENST00000406671 891 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 MIR1290-201ENST00000408735 78 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RN7SKP158-201ENST00000410453 326 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RNU6-387P-201ENST00000411331 105 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.17□□□□□ -1.9
PGGT1BP53609 SKA2P1-201ENST00000425592 390 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 Z82205.1-201ENST00000428456 297 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 AL669831.1-202ENST00000428504 417 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 RPL26P6-201ENST00000440913 438 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.17□□□□□ -1.9
PGGT1BP53609 HMGN2P16-201ENST00000456802 261 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 SLC25A15P5-201ENST00000508033 253 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.17□□□□□ -1.9
PGGT1BP53609 RNU2-69P-201ENST00000516061 100 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.17□□□□□ -1.9
PGGT1BP53609 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.17□□□□□ -1.9
PGGT1BP53609 AC090115.3-201ENST00000553218 849 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 AL163153.1-201ENST00000554223 283 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.17□□□□□ -1.9
PGGT1BP53609 AL162730.1-201ENST00000605734 292 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 SNORA51-201ENST00000606420 132 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.17□□□□□ -1.9
PGGT1BP53609 AC244517.12-201ENST00000623581 663 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PGGT1BP53609 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.17□□□□□ -1.9
PGGT1BP53609 AC103710.2-202ENST00000641454 2853 ntBASIC3.17□□□□□ -1.9
PGGT1BP53609 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PGGT1BP53609 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.16□□□□□ -1.9
PGGT1BP53609 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PGGT1BP53609 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PGGT1BP53609 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 SNORA4.3-201ENST00000365564 137 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.16□□□□□ -1.9
PGGT1BP53609 BTF3L4P3-201ENST00000418879 476 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 AL590632.1-201ENST00000424289 371 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.16□□□□□ -1.9
PGGT1BP53609 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.16□□□□□ -1.9
PGGT1BP53609 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.16□□□□□ -1.9
PGGT1BP53609 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 MTCO3P10-201ENST00000455912 772 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 RPL30P15-201ENST00000457129 321 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 Y_RNA.639-201ENST00000458981 102 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
PGGT1BP53609 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
PGGT1BP53609 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.16□□□□□ -1.9
PGGT1BP53609 AC093303.1-201ENST00000514549 295 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms