Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
MSH6P52701 MIR19A-201ENST00000384878 82 ntBASIC2.28□□□□□ -2.04
MSH6P52701 RNU6-174P-201ENST00000410406 106 ntBASIC2.28□□□□□ -2.04
MSH6P52701 HMGB1P49-201ENST00000418882 569 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AC013410.2-201ENST00000422627 201 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH6P52701 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH6P52701 AC007919.1-201ENST00000429380 217 ntBASIC2.28□□□□□ -2.04
MSH6P52701 USP12PX-201ENST00000432383 1057 ntBASIC2.28□□□□□ -2.04
MSH6P52701 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.28□□□□□ -2.04
MSH6P52701 RPL23AP35-201ENST00000451906 501 ntBASIC2.28□□□□□ -2.04
MSH6P52701 MTND4LP3-201ENST00000468320 276 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.28□□□□□ -2.04
MSH6P52701 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MSH6P52701 HSPE1P23-201ENST00000509838 286 ntBASIC2.28□□□□□ -2.04
MSH6P52701 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
MSH6P52701 AC110760.3-202ENST00000515177 371 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.28□□□□□ -2.04
MSH6P52701 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH6P52701 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH6P52701 AL391261.3-201ENST00000557194 520 ntBASIC2.28□□□□□ -2.04
MSH6P52701 MIR544B-201ENST00000582372 78 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.28□□□□□ -2.04
MSH6P52701 AC021171.1-201ENST00000603137 706 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AL136363.1-201ENST00000605349 337 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AC144521.1-201ENST00000607148 956 ntBASIC2.28□□□□□ -2.04
MSH6P52701 AC239868.4-201ENST00000608318 671 ntBASIC2.28□□□□□ -2.04
MSH6P52701 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
MSH6P52701 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
MSH6P52701 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.28□□□□□ -2.04
MSH6P52701 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MSH6P52701 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
MSH6P52701 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.27□□□□□ -2.05
MSH6P52701 CCNG1P1-201ENST00000406783 885 ntBASIC2.27□□□□□ -2.05
MSH6P52701 USP9YP13-201ENST00000417797 480 ntBASIC2.27□□□□□ -2.05
MSH6P52701 ZNF863P-201ENST00000426746 417 ntBASIC2.27□□□□□ -2.05
MSH6P52701 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.27□□□□□ -2.05
MSH6P52701 AC087588.1-201ENST00000462203 316 ntBASIC2.27□□□□□ -2.05
MSH6P52701 AC010631.1-201ENST00000474150 156 ntBASIC2.27□□□□□ -2.05
MSH6P52701 RBM43P1-201ENST00000476891 1081 ntBASIC2.27□□□□□ -2.05
MSH6P52701 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH6P52701 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH6P52701 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH6P52701 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
MSH6P52701 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.27□□□□□ -2.05
MSH6P52701 AC002545.1-201ENST00000592511 181 ntBASIC2.27□□□□□ -2.05
MSH6P52701 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.27□□□□□ -2.05
MSH6P52701 AC112204.3-201ENST00000623822 332 ntBASIC2.27□□□□□ -2.05
MSH6P52701 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MSH6P52701 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.27□□□□□ -2.05
MSH6P52701 CR848007.1-201ENST00000442354 1699 ntBASIC2.27□□□□□ -2.05
MSH6P52701 UBE2L2-201ENST00000254302 429 ntBASIC2.26□□□□□ -2.05
MSH6P52701 SNORD113-6-201ENST00000363345 75 ntBASIC2.26□□□□□ -2.05
MSH6P52701 RNU6-769P-201ENST00000384407 104 ntBASIC2.26□□□□□ -2.05
MSH6P52701 SNORA67.6-201ENST00000391093 99 ntBASIC2.26□□□□□ -2.05
MSH6P52701 RNU6-193P-201ENST00000410977 107 ntBASIC2.26□□□□□ -2.05
MSH6P52701 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.26□□□□□ -2.05
MSH6P52701 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH6P52701 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH6P52701 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.26□□□□□ -2.05
MSH6P52701 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.26□□□□□ -2.05
MSH6P52701 RNU7-59P-201ENST00000459101 61 ntBASIC2.26□□□□□ -2.05
MSH6P52701 MRPS17P3-201ENST00000465453 385 ntBASIC2.26□□□□□ -2.05
MSH6P52701 RPL31P41-201ENST00000477967 372 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH6P52701 AL160314.1-201ENST00000490836 438 ntBASIC2.26□□□□□ -2.05
MSH6P52701 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.26□□□□□ -2.05
MSH6P52701 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.26□□□□□ -2.05
MSH6P52701 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.26□□□□□ -2.05
MSH6P52701 AP004247.1-201ENST00000531556 1289 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AC068587.4-201ENST00000533893 186 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AC011604.1-201ENST00000545978 196 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.26□□□□□ -2.05
MSH6P52701 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.26□□□□□ -2.05
MSH6P52701 BNIP3P40-201ENST00000596017 556 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AC136443.5-201ENST00000603741 370 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AC004908.2-201ENST00000609090 574 ntBASIC2.26□□□□□ -2.05
MSH6P52701 UCA1.1-201ENST00000620952 75 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AP002782.1-201ENST00000623107 614 ntBASIC2.26□□□□□ -2.05
MSH6P52701 AC097655.1-201ENST00000635075 318 ntBASIC2.26□□□□□ -2.05
MSH6P52701 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
MSH6P52701 CCT4P2-201ENST00000233836 1548 ntBASIC2.26□□□□□ -2.05
MSH6P52701 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
MSH6P52701 RNA5SP325-201ENST00000363756 130 ntBASIC2.25□□□□□ -2.05
MSH6P52701 RNU6-53P-201ENST00000365367 106 ntBASIC2.25□□□□□ -2.05
MSH6P52701 RPL21P24-201ENST00000413752 448 ntBASIC2.25□□□□□ -2.05
MSH6P52701 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.25□□□□□ -2.05
MSH6P52701 MTATP6P30-201ENST00000443540 664 ntBASIC2.25□□□□□ -2.05
MSH6P52701 ELOCP30-201ENST00000447108 299 ntBASIC2.25□□□□□ -2.05
MSH6P52701 AC020550.1-201ENST00000447385 163 ntBASIC2.25□□□□□ -2.05
MSH6P52701 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH6P52701 RPL12P25-201ENST00000455592 494 ntBASIC2.25□□□□□ -2.05
MSH6P52701 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.25□□□□□ -2.05
MSH6P52701 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.25□□□□□ -2.05
MSH6P52701 SNORD11.1-201ENST00000459482 85 ntBASIC2.25□□□□□ -2.05
MSH6P52701 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.25□□□□□ -2.05
MSH6P52701 OR5BM1P-201ENST00000512021 366 ntBASIC2.25□□□□□ -2.05
MSH6P52701 RNU6-927P-201ENST00000516199 100 ntBASIC2.25□□□□□ -2.05
MSH6P52701 RNU1-92P-201ENST00000517017 135 ntBASIC2.25□□□□□ -2.05
MSH6P52701 SUB1P1-201ENST00000524415 382 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms