Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNU1-78P-201ENST00000391248 165 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 MIR1262-201ENST00000408276 93 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 RNU2-36P-201ENST00000410361 191 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 RNU2-48P-201ENST00000410694 191 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 MTCYBP38-201ENST00000417160 1123 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC007435.1-201ENST00000421086 415 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 MTCO3P1-205ENST00000422088 832 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 AC010153.1-201ENST00000432862 727 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 NANOGP2-201ENST00000435391 727 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 MTND1P28-201ENST00000435623 950 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AL354941.1-201ENST00000438600 464 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 RPL39P29-201ENST00000447779 157 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 AC011005.2-201ENST00000487324 359 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.82□□□□□ -2.28
POLR2JP52435 BOLA3P3-201ENST00000505182 232 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 COPS8P3-201ENST00000526024 482 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 OR5B19P-201ENST00000531766 928 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC005832.3-201ENST00000537929 631 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC125611.1-201ENST00000549563 229 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
POLR2JP52435 AC002550.2-201ENST00000621246 394 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.82□□□□□ -2.28
POLR2JP52435 AL590396.4-201ENST00000636779 956 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.82□□□□□ -2.28
POLR2JP52435 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
POLR2JP52435 TEX21P-201ENST00000447107 1476 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
POLR2JP52435 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
POLR2JP52435 Y_RNA.67-201ENST00000362870 100 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 SNORD56.4-201ENST00000363883 71 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 MIR29C-201ENST00000385231 88 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.81□□□□□ -2.28
POLR2JP52435 C1DP1-201ENST00000426049 402 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AL353706.1-201ENST00000436728 494 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 RPS15AP17-201ENST00000470598 390 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 RNU6-667P-201ENST00000517186 102 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AC103833.1-201ENST00000517442 172 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 RPL21P5-201ENST00000554662 472 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR2JP52435 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AC012360.2-201ENST00000609349 391 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 MIR1264-201ENST00000616374 69 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 U1.36-201ENST00000620684 176 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AL138713.1-201ENST00000624026 2130 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 AC090517.3-201ENST00000625170 141 ntBASIC0.81□□□□□ -2.28
POLR2JP52435 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
POLR2JP52435 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
POLR2JP52435 RNA5SP99-201ENST00000364020 114 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 RNU6-53P-201ENST00000365367 106 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 RNU6-1032P-201ENST00000384100 107 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC127391.1-201ENST00000411737 98 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AL353621.1-201ENST00000418219 243 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 MTCO2P20-201ENST00000437339 673 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC002542.1-201ENST00000440683 193 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 SNRPFP4-201ENST00000456366 242 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC112771.1-201ENST00000463581 102 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR2JP52435 AL133373.1-201ENST00000497098 94 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.8□□□□□ -2.28
POLR2JP52435 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR2JP52435 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR2JP52435 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR2JP52435 AC233266.2-201ENST00000567067 528 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC005668.1-201ENST00000571142 476 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR2JP52435 MIR4422-201ENST00000581938 83 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.8□□□□□ -2.28
POLR2JP52435 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.8□□□□□ -2.28
POLR2JP52435 BNIP3P27-201ENST00000599991 412 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AP000942.3-201ENST00000603702 160 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC099842.1-201ENST00000619919 596 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AC091965.5-201ENST00000624785 342 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AL136313.1-201ENST00000624804 202 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AP003485.1-201ENST00000625093 753 ntBASIC0.8□□□□□ -2.28
POLR2JP52435 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.8□□□□□ -2.28
POLR2JP52435 MTND5P9-201ENST00000503854 1755 ntBASIC0.79□□□□□ -2.28
POLR2JP52435 MIR217-201ENST00000384817 110 ntBASIC0.79□□□□□ -2.28
POLR2JP52435 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
POLR2JP52435 RNA5SP100-201ENST00000410903 110 ntBASIC0.79□□□□□ -2.28
POLR2JP52435 RNA5SP59-201ENST00000410922 110 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms