Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.78□□□□□ -1.96
LHX1P48742 AC009901.1-201ENST00000506703 541 ntBASIC2.78□□□□□ -1.96
LHX1P48742 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.78□□□□□ -1.96
LHX1P48742 RNU4-29P-201ENST00000515943 174 ntBASIC2.78□□□□□ -1.96
LHX1P48742 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.78□□□□□ -1.96
LHX1P48742 SUB1P1-201ENST00000524415 382 ntBASIC2.78□□□□□ -1.96
LHX1P48742 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.78□□□□□ -1.96
LHX1P48742 AL157871.3-201ENST00000557231 293 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC008521.1-201ENST00000587471 187 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC004223.2-201ENST00000590309 544 ntBASIC2.78□□□□□ -1.96
LHX1P48742 NRBF2P5-201ENST00000603087 788 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC064807.4-201ENST00000607201 407 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC024940.5-201ENST00000622889 474 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC090617.7-201ENST00000623952 126 ntBASIC2.78□□□□□ -1.96
LHX1P48742 U6.99-201ENST00000637524 83 ntBASIC2.78□□□□□ -1.96
LHX1P48742 AC110491.1-201ENST00000562191 2010 ntBASIC2.78□□□□□ -1.96
LHX1P48742 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LHX1P48742 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
LHX1P48742 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LHX1P48742 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.77□□□□□ -1.97
LHX1P48742 SNORD62.1-201ENST00000362541 86 ntBASIC2.77□□□□□ -1.97
LHX1P48742 RNU6-623P-201ENST00000363143 105 ntBASIC2.77□□□□□ -1.97
LHX1P48742 RNA5SP68-201ENST00000363885 119 ntBASIC2.77□□□□□ -1.97
LHX1P48742 SNORD115-7-201ENST00000365306 82 ntBASIC2.77□□□□□ -1.97
LHX1P48742 Y_RNA.576-201ENST00000384781 102 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
LHX1P48742 RNU6-1025P-201ENST00000410629 104 ntBASIC2.77□□□□□ -1.97
LHX1P48742 MORF4L1P6-201ENST00000418771 268 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.77□□□□□ -1.97
LHX1P48742 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LHX1P48742 AL160275.3-201ENST00000423876 471 ntBASIC2.77□□□□□ -1.97
LHX1P48742 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.77□□□□□ -1.97
LHX1P48742 DLGAP5P1-201ENST00000430307 464 ntBASIC2.77□□□□□ -1.97
LHX1P48742 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.77□□□□□ -1.97
LHX1P48742 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.77□□□□□ -1.97
LHX1P48742 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.77□□□□□ -1.97
LHX1P48742 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.77□□□□□ -1.97
LHX1P48742 RNU7-182P-201ENST00000459009 62 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC108078.1-201ENST00000508073 725 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC091133.4-201ENST00000511142 308 ntBASIC2.77□□□□□ -1.97
LHX1P48742 RNU6-703P-201ENST00000516946 107 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC009902.1-201ENST00000519351 183 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC025755.1-201ENST00000521306 278 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC025281.1-201ENST00000567026 265 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AGGF1P4-201ENST00000568249 801 ntBASIC2.77□□□□□ -1.97
LHX1P48742 MIR1273C-201ENST00000578669 77 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
LHX1P48742 AL670379.4-201ENST00000605279 254 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC126118.1-201ENST00000607744 628 ntBASIC2.77□□□□□ -1.97
LHX1P48742 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LHX1P48742 AC002064.3-201ENST00000623448 346 ntBASIC2.77□□□□□ -1.97
LHX1P48742 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.77□□□□□ -1.97
LHX1P48742 SEPT14P19-203ENST00000633205 211 ntBASIC2.77□□□□□ -1.97
LHX1P48742 AC092447.7-201ENST00000422212 1621 ntBASIC2.77□□□□□ -1.97
LHX1P48742 ELF2P3-201ENST00000445099 1506 ntBASIC2.77□□□□□ -1.97
LHX1P48742 Y_RNA.33-201ENST00000362591 102 ntBASIC2.76□□□□□ -1.97
LHX1P48742 RNU4-75P-201ENST00000364621 146 ntBASIC2.76□□□□□ -1.97
LHX1P48742 RNU4-48P-201ENST00000365559 182 ntBASIC2.76□□□□□ -1.97
LHX1P48742 RNU6-395P-201ENST00000365662 106 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 RNU2-9P-201ENST00000410194 145 ntBASIC2.76□□□□□ -1.97
LHX1P48742 RNU2-49P-201ENST00000410666 184 ntBASIC2.76□□□□□ -1.97
LHX1P48742 MTATP6P18-201ENST00000417994 673 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.76□□□□□ -1.97
LHX1P48742 USP9YP20-201ENST00000419224 558 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC098614.2-201ENST00000426040 255 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC009414.1-201ENST00000427200 443 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC010975.2-201ENST00000427781 588 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 CALM2P2-201ENST00000428512 440 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.76□□□□□ -1.97
LHX1P48742 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.76□□□□□ -1.97
LHX1P48742 AC002486.1-201ENST00000435098 391 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AL451074.3-201ENST00000437709 472 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 RPS15AP9-201ENST00000439856 381 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC098831.1-201ENST00000440661 216 ntBASIC2.76□□□□□ -1.97
LHX1P48742 BRK1P2-201ENST00000442875 223 ntBASIC2.76□□□□□ -1.97
LHX1P48742 WASF1P1-201ENST00000447560 1131 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.76□□□□□ -1.97
LHX1P48742 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 HMGB1P29-201ENST00000505659 499 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC104806.1-201ENST00000508720 308 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.76□□□□□ -1.97
LHX1P48742 MIR4513-201ENST00000581077 86 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.76□□□□□ -1.97
LHX1P48742 AC005498.1-201ENST00000592125 465 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AL355877.2-201ENST00000603670 358 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC007938.3-201ENST00000604965 623 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC008536.2-201ENST00000607284 349 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC013562.2-201ENST00000611632 603 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC107871.2-201ENST00000612894 502 ntBASIC2.76□□□□□ -1.97
LHX1P48742 MIR6817-201ENST00000615588 66 ntBASIC2.76□□□□□ -1.97
LHX1P48742 AC099654.7-201ENST00000635788 2127 ntBASIC2.76□□□□□ -1.97
LHX1P48742 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LHX1P48742 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LHX1P48742 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LHX1P48742 CKAP2P1-201ENST00000555477 2049 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms