Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.53□□□□□ -2
TNFRSF4P43489 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TNFRSF4P43489 FARSBP1-201ENST00000435808 1778 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFRSF4P43489 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFRSF4P43489 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFRSF4P43489 RNU4-1-201ENST00000363925 141 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 Y_RNA.194-201ENST00000363985 102 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 SET-203ENST00000372688 801 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 RPL21P75-201ENST00000396599 483 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 RPL21P28-201ENST00000401418 483 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL592114.1-201ENST00000403842 483 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 RNA5SP425-201ENST00000410336 112 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL663109.1-201ENST00000411498 844 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC080125.1-201ENST00000414888 684 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC104850.1-201ENST00000435940 476 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 HMGN2P10-201ENST00000448085 265 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 RPL21P39-201ENST00000463605 483 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 RPL23AP11-201ENST00000475260 469 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 RAP1BP2-201ENST00000478270 544 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 RPL21P93-201ENST00000480465 489 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC087190.1-201ENST00000484462 480 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC093591.1-201ENST00000491435 481 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 RPL21P16-201ENST00000495531 483 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 MTCO3P7-201ENST00000510008 774 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 RN7SKP298-201ENST00000515950 94 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 SCARNA11.3-201ENST00000517276 130 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC084851.1-201ENST00000529105 249 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC135279.1-201ENST00000543493 504 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC021739.1-201ENST00000559631 174 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 MIR4528-201ENST00000577763 90 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TNFRSF4P43489 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC073648.5-201ENST00000603502 305 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC091304.9-201ENST00000612091 226 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC130324.3-201ENST00000614165 542 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC009509.4-201ENST00000619202 509 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AC139792.2-201ENST00000624218 587 ntBASIC2.52□□□□□ -2.01
TNFRSF4P43489 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFRSF4P43489 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFRSF4P43489 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 RNY1P12-201ENST00000364251 105 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 RNU6-1042P-201ENST00000384204 107 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 RPL7P10-201ENST00000417407 739 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 BX295541.1-201ENST00000417774 250 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 RPL31P35-201ENST00000431058 377 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AL591704.1-201ENST00000432574 275 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC009961.2-201ENST00000435771 251 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 AL031667.1-201ENST00000440222 725 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 BRK1P2-201ENST00000442875 223 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 HIGD1AP2-201ENST00000446367 280 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TNFRSF4P43489 FABP5P13-201ENST00000452144 328 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 UBL5P3-201ENST00000475112 231 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 TRBV1-201ENST00000476502 284 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 SCARNA17.1-201ENST00000516211 143 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 SCARNA17.2-201ENST00000516334 143 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 Vault.3-201ENST00000516676 95 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 SNORD19.2-201ENST00000516978 73 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 RN7SKP40-201ENST00000517211 242 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AP002963.1-201ENST00000530590 184 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.51□□□□□ -2.01
TNFRSF4P43489 AC006199.1-201ENST00000548728 219 ntBASIC2.51□□□□□ -2.01
TNFRSF4P43489 MTND1P15-201ENST00000579262 949 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms