Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL356320.2-201ENST00000417263 507 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.2□□□□□ -2.38
HTTP42858 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.2□□□□□ -2.38
HTTP42858 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.2□□□□□ -2.38
HTTP42858 AGGF1P5-201ENST00000567900 919 ntBASIC0.2□□□□□ -2.38
HTTP42858 AP001269.3-201ENST00000588718 329 ntBASIC0.2□□□□□ -2.38
HTTP42858 OR1M4P-201ENST00000589199 287 ntBASIC0.2□□□□□ -2.38
HTTP42858 FRG1HP-204ENST00000617940 757 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC020923.1-201ENST00000624021 917 ntBASIC0.2□□□□□ -2.38
HTTP42858 AP003072.4-201ENST00000624580 310 ntBASIC0.2□□□□□ -2.38
HTTP42858 AC023934.1-201ENST00000574529 2389 ntBASIC0.19□□□□□ -2.38
HTTP42858 RNU1-124P-201ENST00000363861 145 ntBASIC0.19□□□□□ -2.38
HTTP42858 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
HTTP42858 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.19□□□□□ -2.38
HTTP42858 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.19□□□□□ -2.38
HTTP42858 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.19□□□□□ -2.38
HTTP42858 HSPE1P21-201ENST00000438283 308 ntBASIC0.19□□□□□ -2.38
HTTP42858 RPL23AP3-201ENST00000453844 468 ntBASIC0.19□□□□□ -2.38
HTTP42858 BX248409.1-201ENST00000455497 255 ntBASIC0.19□□□□□ -2.38
HTTP42858 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HTTP42858 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.19□□□□□ -2.38
HTTP42858 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HTTP42858 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.19□□□□□ -2.38
HTTP42858 SNORA31.13-201ENST00000516624 135 ntBASIC0.19□□□□□ -2.38
HTTP42858 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.19□□□□□ -2.38
HTTP42858 AC106900.2-201ENST00000604994 317 ntBASIC0.19□□□□□ -2.38
HTTP42858 AL450336.1-201ENST00000605180 586 ntBASIC0.19□□□□□ -2.38
HTTP42858 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HTTP42858 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
HTTP42858 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.19□□□□□ -2.38
HTTP42858 AL590365.1-201ENST00000450788 243 ntBASIC0.19□□□□□ -2.38
HTTP42858 RNU6-1004P-201ENST00000516584 111 ntBASIC0.19□□□□□ -2.38
HTTP42858 AC026371.1-201ENST00000551867 419 ntBASIC0.19□□□□□ -2.38
HTTP42858 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.19□□□□□ -2.38
HTTP42858 AC093838.1-201ENST00000613014 469 ntBASIC0.19□□□□□ -2.38
HTTP42858 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.19□□□□□ -2.38
HTTP42858 Y_RNA.288-201ENST00000364854 92 ntBASIC0.18□□□□□ -2.38
HTTP42858 Y_RNA.495-201ENST00000384435 112 ntBASIC0.18□□□□□ -2.38
HTTP42858 MIR618-201ENST00000385287 98 ntBASIC0.18□□□□□ -2.38
HTTP42858 VN1R36P-201ENST00000414936 291 ntBASIC0.18□□□□□ -2.38
HTTP42858 VPS26BP1-201ENST00000417155 755 ntBASIC0.18□□□□□ -2.38
HTTP42858 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.18□□□□□ -2.38
HTTP42858 AC093106.2-201ENST00000428212 385 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AL354941.1-201ENST00000438600 464 ntBASIC0.18□□□□□ -2.38
HTTP42858 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.18□□□□□ -2.38
HTTP42858 RNU5F-8P-201ENST00000515941 111 ntBASIC0.18□□□□□ -2.38
HTTP42858 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.18□□□□□ -2.38
HTTP42858 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
HTTP42858 U4.2-201ENST00000618561 85 ntBASIC0.18□□□□□ -2.38
HTTP42858 RNU6-833P-201ENST00000363486 107 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.18□□□□□ -2.38
HTTP42858 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AC092393.1-201ENST00000439625 742 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.18□□□□□ -2.38
HTTP42858 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AC114982.1-201ENST00000469402 321 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC108120.2-201ENST00000512973 294 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.18□□□□□ -2.38
HTTP42858 AC022690.1-201ENST00000526681 550 ntBASIC0.18□□□□□ -2.38
HTTP42858 AL133241.1-201ENST00000556832 487 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC091489.2-201ENST00000566263 604 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AC004241.3-201ENST00000611728 517 ntBASIC0.18□□□□□ -2.38
HTTP42858 MIR4496-201ENST00000635896 61 ntBASIC0.18□□□□□ -2.38
HTTP42858 ZNF663P-202ENST00000641770 1131 ntBASIC0.18□□□□□ -2.38
HTTP42858 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
HTTP42858 RNU6-271P-201ENST00000363858 105 ntBASIC0.18□□□□□ -2.38
HTTP42858 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.18□□□□□ -2.38
HTTP42858 RNU6-1328P-201ENST00000410938 106 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC009310.1-201ENST00000414414 451 ntBASIC0.18□□□□□ -2.38
HTTP42858 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.18□□□□□ -2.38
HTTP42858 AC096920.1-201ENST00000423991 241 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.18□□□□□ -2.38
HTTP42858 AL133373.1-201ENST00000497098 94 ntBASIC0.18□□□□□ -2.38
HTTP42858 AF213884.2-201ENST00000510417 903 ntBASIC0.18□□□□□ -2.38
HTTP42858 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.18□□□□□ -2.38
HTTP42858 AC012435.1-202ENST00000568772 240 ntBASIC0.18□□□□□ -2.38
HTTP42858 MIR3198-2-201ENST00000577868 80 ntBASIC0.18□□□□□ -2.38
HTTP42858 MTCO2P2-201ENST00000591258 225 ntBASIC0.18□□□□□ -2.38
HTTP42858 HSPE1P19-201ENST00000603327 295 ntBASIC0.18□□□□□ -2.38
HTTP42858 AL159152.1-201ENST00000635019 2587 ntBASIC0.17□□□□□ -2.38
HTTP42858 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
HTTP42858 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
HTTP42858 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.17□□□□□ -2.38
HTTP42858 RPL21P111-201ENST00000418453 477 ntBASIC0.17□□□□□ -2.38
HTTP42858 AL645638.1-201ENST00000440519 361 ntBASIC0.17□□□□□ -2.38
HTTP42858 RPL21P103-201ENST00000479921 488 ntBASIC0.17□□□□□ -2.38
HTTP42858 AC099513.1-201ENST00000490423 301 ntBASIC0.17□□□□□ -2.38
HTTP42858 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.17□□□□□ -2.38
HTTP42858 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.17□□□□□ -2.38
HTTP42858 SNRPGP16-201ENST00000533275 226 ntBASIC0.17□□□□□ -2.38
HTTP42858 AC141557.1-201ENST00000540982 400 ntBASIC0.17□□□□□ -2.38
HTTP42858 FAM60CP-201ENST00000591086 664 ntBASIC0.17□□□□□ -2.38
HTTP42858 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.17□□□□□ -2.38
HTTP42858 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.17□□□□□ -2.38
HTTP42858 snoU13.9-201ENST00000458927 103 ntBASIC0.17□□□□□ -2.38
HTTP42858 AL163195.1-201ENST00000496941 348 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms