Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AL590002.1-201ENST00000406554 418 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 SNORD88.1-201ENST00000408684 91 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RNU2-62P-201ENST00000410868 191 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HNF4AP41235 AL353729.1-201ENST00000425044 720 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RPL35AP12-201ENST00000425362 338 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AL139415.2-201ENST00000431968 163 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RPL23AP30-201ENST00000432419 501 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
HNF4AP41235 MTATP6P7-201ENST00000453315 681 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RPL21P41-201ENST00000459863 264 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 TRBV1-201ENST00000476502 284 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AC023194.1-201ENST00000493084 308 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.83□□□□□ -1.96
HNF4AP41235 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 SCARNA24.1-201ENST00000516465 137 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.83□□□□□ -1.96
HNF4AP41235 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.83□□□□□ -1.96
HNF4AP41235 SUB1P2-201ENST00000556401 297 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.83□□□□□ -1.96
HNF4AP41235 MTCO3P13-201ENST00000577757 781 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.83□□□□□ -1.96
HNF4AP41235 AL391813.1-201ENST00000603098 260 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RBM11P1-201ENST00000604951 799 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AC017083.3-201ENST00000609955 700 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AC007014.2-201ENST00000615581 479 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AL449363.1-201ENST00000617815 186 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 AC010338.1-201ENST00000621823 717 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 MIR6733-201ENST00000635723 61 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HNF4AP41235 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HNF4AP41235 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.82□□□□□ -1.96
HNF4AP41235 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.82□□□□□ -1.96
HNF4AP41235 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HNF4AP41235 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HNF4AP41235 AC000403.1-201ENST00000613696 3585 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 SNORD56.2-201ENST00000363242 71 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RNU6-511P-201ENST00000363496 107 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RNY1P12-201ENST00000364251 105 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RNU4-12P-201ENST00000365233 139 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RNU6-1283P-201ENST00000365314 105 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RNU6-456P-201ENST00000384493 107 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 SNORA48.5-201ENST00000391143 135 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.82□□□□□ -1.96
HNF4AP41235 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.82□□□□□ -1.96
HNF4AP41235 MRPS10P2-201ENST00000431226 381 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 AL596276.1-201ENST00000434465 418 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 AC233279.1-201ENST00000455300 423 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RNA5SP76-201ENST00000516277 87 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.82□□□□□ -1.96
HNF4AP41235 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.82□□□□□ -1.96
HNF4AP41235 ARL2BPP2-201ENST00000550907 489 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 RPS3AP4-201ENST00000555161 764 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.82□□□□□ -1.96
HNF4AP41235 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.82□□□□□ -1.96
HNF4AP41235 AC025449.1-201ENST00000603896 529 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 Z84480.1-201ENST00000605131 311 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 AP001596.2-201ENST00000608410 312 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.82□□□□□ -1.96
HNF4AP41235 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HNF4AP41235 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.82□□□□□ -1.96
HNF4AP41235 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HNF4AP41235 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.82□□□□□ -1.96
HNF4AP41235 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.82□□□□□ -1.96
HNF4AP41235 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.82□□□□□ -1.96
HNF4AP41235 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HNF4AP41235 AC080128.1-201ENST00000474389 1917 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC096644.4-201ENST00000563417 2912 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 RNU1-35P-201ENST00000362782 153 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 RNU6-1090P-201ENST00000364065 94 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 Y_RNA.256-201ENST00000364594 104 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 Y_RNA.381-201ENST00000365666 102 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.81□□□□□ -1.96
HNF4AP41235 Y_RNA.450-201ENST00000384198 113 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 RNU6-658P-201ENST00000384606 106 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC068050.1-201ENST00000394891 380 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AL451074.5-201ENST00000415894 435 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC137499.1-201ENST00000427602 88 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 TIMM9P3-201ENST00000428659 274 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 RBMX2P4-201ENST00000441256 376 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.81□□□□□ -1.96
HNF4AP41235 HMGN2P10-201ENST00000448085 265 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 FGF7P6-202ENST00000451282 293 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 GSTA11P-201ENST00000452866 669 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC092989.1-201ENST00000481235 277 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.81□□□□□ -1.96
HNF4AP41235 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.81□□□□□ -1.96
HNF4AP41235 Y_RNA.704-201ENST00000516851 102 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.81□□□□□ -1.96
HNF4AP41235 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.81□□□□□ -1.96
HNF4AP41235 OR5AQ1P-201ENST00000527596 927 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AP003072.2-201ENST00000527756 676 ntBASIC2.81□□□□□ -1.96
HNF4AP41235 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms