Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXC12P31275 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC12P31275 AC131281.1-201ENST00000522984 164 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXC12P31275 AC040926.1-201ENST00000530195 238 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 AL355297.3-201ENST00000604082 446 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 Z98751.3-201ENST00000604447 521 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 AC110741.2-201ENST00000605278 268 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 AC114781.5-201ENST00000615297 108 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.99□□□□□ -1.77
HOXC12P31275 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXC12P31275 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC12P31275 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC12P31275 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXC12P31275 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC12P31275 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC12P31275 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HOXC12P31275 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC12P31275 RNU6-227P-201ENST00000362865 103 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 RNU6-527P-201ENST00000363425 104 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 Z98749.2-208ENST00000381646 500 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 PTMAP5-201ENST00000393073 333 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC12P31275 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AL356387.2-201ENST00000422272 243 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 HMGN2P30-201ENST00000423237 256 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 TMEM167AP1-201ENST00000423409 219 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 RPS3AP12-201ENST00000443616 753 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC12P31275 MTATP6P7-201ENST00000453315 681 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXC12P31275 RPL7P47-201ENST00000497299 556 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 IGKV2-23-201ENST00000518729 323 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 IGKV2D-19-201ENST00000523346 262 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 CYCSP29-201ENST00000533731 318 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC12P31275 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AC105129.1-201ENST00000560250 297 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 MIR5701-3-201ENST00000578890 82 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 MIR4429-201ENST00000580105 73 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 MIR5701-1-201ENST00000585138 82 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AC008962.1-201ENST00000605729 304 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AC009318.2-201ENST00000610917 651 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AL021879.1-201ENST00000611756 288 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 MIR5701-2-201ENST00000615634 82 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 AL445567.2-201ENST00000618935 498 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC12P31275 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC12P31275 MTND5P27-201ENST00000428871 1720 ntBASIC3.98□□□□□ -1.77
HOXC12P31275 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXC12P31275 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC12P31275 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC12P31275 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC12P31275 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC12P31275 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXC12P31275 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXC12P31275 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC12P31275 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC12P31275 AC021146.4-201ENST00000309229 279 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RNA5SP295-201ENST00000362655 121 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 Y_RNA.106-201ENST00000363189 100 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RNU6-884P-201ENST00000363889 107 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 Y_RNA.210-201ENST00000364161 110 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RN7SKP280-201ENST00000364196 304 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RNU6-898P-201ENST00000365627 104 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RNU1-73P-201ENST00000383971 164 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RPS26P8-201ENST00000393490 348 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RPS29P13-201ENST00000402041 169 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 MIR1252-201ENST00000408861 65 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC12P31275 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 MTCO3P8-201ENST00000453691 755 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 RPS29P27-201ENST00000463711 170 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 AC108022.1-201ENST00000493466 478 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 SNORA31.9-201ENST00000516429 84 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 Y_RNA.715-201ENST00000517082 110 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 IGLVIV-65-201ENST00000517313 360 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC12P31275 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC12P31275 AMZ2P1-203ENST00000565833 850 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC12P31275 VN1R91P-201ENST00000594377 169 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 VN1R107P-201ENST00000601784 209 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 AC015813.4-201ENST00000610469 179 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 U2.21-201ENST00000637295 81 ntBASIC3.97□□□□□ -1.77
HOXC12P31275 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC12P31275 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.96□□□□□ -1.77
HOXC12P31275 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.96□□□□□ -1.77
HOXC12P31275 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC12P31275 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.77
HOXC12P31275 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC12P31275 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC12P31275 AL672296.1-201ENST00000427780 2158 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC12P31275 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC12P31275 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC12P31275 RNU6-778P-201ENST00000363269 103 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 Y_RNA.123-201ENST00000363338 102 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 RNU1-83P-201ENST00000363426 164 ntBASIC3.96□□□□□ -1.78
HOXC12P31275 Y_RNA.512-201ENST00000384518 102 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms