Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC108860.1-201ENST00000484521 383 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC096576.1-201ENST00000489014 359 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC097462.2-201ENST00000504623 481 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXA11P31270 AC103851.1-201ENST00000506833 274 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AL359273.1-201ENST00000510918 627 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 SCARNA15.1-201ENST00000516384 125 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 RNU6-1092P-201ENST00000516955 87 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA11P31270 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA11P31270 HPRT1P3-201ENST00000539521 576 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA11P31270 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA11P31270 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA11P31270 AL022345.1-201ENST00000607292 135 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXA11P31270 AC005858.4-201ENST00000623191 700 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AC011155.2-201ENST00000623202 216 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AL136313.1-201ENST00000624804 202 ntBASIC3.32□□□□□ -1.88
HOXA11P31270 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXA11P31270 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXA11P31270 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA11P31270 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 RNU6-61P-201ENST00000365528 109 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA11P31270 RNU6-1029P-201ENST00000384109 107 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 RNU6-432P-201ENST00000384196 109 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXA11P31270 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXA11P31270 MIR1302-11-201ENST00000408051 138 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 MIR1302-9-201ENST00000408365 138 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 MIR1302-10-201ENST00000408734 138 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 RNU6-387P-201ENST00000411331 105 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 AL354751.2-201ENST00000415471 210 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 COTL1P1-201ENST00000422309 375 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXA11P31270 AC233279.1-201ENST00000455300 423 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 AC007547.1-201ENST00000462177 490 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA11P31270 RPS29P26-201ENST00000477483 171 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 SNORA70.16-201ENST00000516390 95 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 RN7SKP256-201ENST00000517201 314 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 AC103783.1-201ENST00000520506 373 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA11P31270 MIR3921-201ENST00000577308 85 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 MIR1302-2-201ENST00000607096 138 ntBASIC3.31□□□□□ -1.88
HOXA11P31270 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA11P31270 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA11P31270 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.3□□□□□ -1.88
HOXA11P31270 AC008568.2-201ENST00000623862 2313 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXA11P31270 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HOXA11P31270 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA11P31270 SNORA62.1-201ENST00000364287 154 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 SNORD115-7-201ENST00000365306 82 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AL359634.1-202ENST00000404721 284 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 RNU2-43P-201ENST00000410306 190 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 Y_RNA.615-201ENST00000410769 117 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 RPL7L1P10-201ENST00000427790 463 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AL139132.1-201ENST00000431587 344 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA11P31270 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA11P31270 GAPDHP27-201ENST00000447427 1020 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA11P31270 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA11P31270 RPS29P15-201ENST00000458329 171 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 RNU7-66P-201ENST00000459469 62 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXA11P31270 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXA11P31270 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXA11P31270 SCOCP1-201ENST00000554676 349 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA11P31270 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA11P31270 AL355375.2-201ENST00000574825 175 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 SNHG22-203ENST00000617833 660 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 AL137790.1-201ENST00000634283 177 ntBASIC3.3□□□□□ -1.88
HOXA11P31270 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA11P31270 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA11P31270 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXA11P31270 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HOXA11P31270 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HOXA11P31270 RNU6-179P-201ENST00000363350 107 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 Y_RNA.184-201ENST00000363884 108 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNU6-82P-201ENST00000363970 107 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNU6-641P-201ENST00000384006 107 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 Y_RNA.431-201ENST00000384086 102 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 U3.26-201ENST00000391236 204 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA11P31270 TXNP7-201ENST00000406296 293 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 RNU4-26P-201ENST00000410270 107 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA11P31270 OR6C66P-201ENST00000414917 930 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 HMGB1P18-201ENST00000438801 619 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AL118496.2-201ENST00000448300 230 ntBASIC3.29□□□□□ -1.88
HOXA11P31270 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms