Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AC008264.1-201ENST00000447612 367 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 RPS26P28-201ENST00000470806 348 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 AC008716.1-201ENST00000511084 513 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 RN7SKP18-201ENST00000516005 275 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 DEFB108D-201ENST00000527787 222 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA10P31260 MIR4298-201ENST00000584380 73 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA10P31260 SNHG22-203ENST00000617833 660 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HOXA10P31260 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA10P31260 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA10P31260 AC015813.6-201ENST00000624409 5808 ntBASIC4.74□□□□□ -1.65
HOXA10P31260 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA10P31260 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA10P31260 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA10P31260 AC011978.2-201ENST00000569835 2054 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 PRO1804-201ENST00000623780 2050 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA10P31260 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA10P31260 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HOXA10P31260 RNU6-1266P-201ENST00000362794 105 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 snoU2_19.2-201ENST00000363024 80 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 RNU6-1317P-201ENST00000364582 104 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 RNU6-1293P-201ENST00000384077 107 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 Y_RNA.480-201ENST00000384364 102 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 RNVU1-14-201ENST00000384770 164 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 MIR215-201ENST00000384858 110 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA10P31260 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA10P31260 FABP5P13-201ENST00000452144 328 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 RN7SL585P-201ENST00000470538 280 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA10P31260 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA10P31260 DEFB108E-201ENST00000524692 240 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 AC087441.2-201ENST00000529141 262 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA10P31260 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA10P31260 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 RNU6-156P-201ENST00000621869 107 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 AC007998.5-201ENST00000622938 237 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 ZNF962P-201ENST00000443465 3140 ntBASIC4.73□□□□□ -1.65
HOXA10P31260 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXA10P31260 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA10P31260 NEAT1-202ENST00000501122 22743 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA10P31260 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA10P31260 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HOXA10P31260 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HOXA10P31260 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXA10P31260 MIR411-201ENST00000362239 96 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 Y_RNA.48-201ENST00000362710 103 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 Y_RNA.199-201ENST00000364014 102 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 SNORD115-46-201ENST00000390982 71 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA10P31260 AC018437.1-201ENST00000492214 406 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 AC067942.3-201ENST00000512025 362 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXA10P31260 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA10P31260 AC004584.2-201ENST00000570407 410 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 MIR4273-201ENST00000582824 84 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 MIR5195-201ENST00000583555 115 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.72□□□□□ -1.65
HOXA10P31260 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA10P31260 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXA10P31260 AP001485.1-201ENST00000604799 199 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA10P31260 AL589994.2-201ENST00000621124 579 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 AC021753.1-201ENST00000635724 168 ntBASIC4.72□□□□□ -1.65
HOXA10P31260 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA10P31260 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA10P31260 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
HOXA10P31260 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
HOXA10P31260 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA10P31260 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXA10P31260 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXA10P31260 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA10P31260 RNU6-1243P-201ENST00000364028 107 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 MIR628-201ENST00000385229 95 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA10P31260 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA10P31260 NDUFB4P10-201ENST00000452541 359 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA10P31260 RNU6-1278P-201ENST00000516130 107 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 RNU6-1338P-201ENST00000516328 91 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 IGKV2-38-201ENST00000517443 247 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 IGLV3-26-201ENST00000520756 302 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 AC022695.1-201ENST00000522089 237 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA10P31260 AC008962.1-201ENST00000605729 304 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 MIR1244-1-201ENST00000612829 85 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 AL136964.1-201ENST00000622038 2990 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 MIR1244-3-201ENST00000635744 85 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 MIR1244-2-201ENST00000636449 85 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 MIR1244-4-202ENST00000636813 85 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA10P31260 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 HSPA8P1-201ENST00000425843 1833 ntBASIC4.71□□□□□ -1.66
HOXA10P31260 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms