Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC108022.1-201ENST00000493466 478 ntBASIC4.94□□□□□ -1.62
RXRBP28702 RNU6-182P-201ENST00000516970 105 ntBASIC4.94□□□□□ -1.62
RXRBP28702 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.94□□□□□ -1.62
RXRBP28702 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.94□□□□□ -1.62
RXRBP28702 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.94□□□□□ -1.62
RXRBP28702 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.94□□□□□ -1.62
RXRBP28702 AC109446.1-201ENST00000566172 220 ntBASIC4.94□□□□□ -1.62
RXRBP28702 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.94□□□□□ -1.62
RXRBP28702 AL670379.6-201ENST00000603753 252 ntBASIC4.94□□□□□ -1.62
RXRBP28702 AL670379.1-201ENST00000604752 252 ntBASIC4.94□□□□□ -1.62
RXRBP28702 AL670379.5-201ENST00000605253 252 ntBASIC4.94□□□□□ -1.62
RXRBP28702 AL670379.8-201ENST00000605353 252 ntBASIC4.94□□□□□ -1.62
RXRBP28702 AL670379.7-201ENST00000605823 252 ntBASIC4.94□□□□□ -1.62
RXRBP28702 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.94□□□□□ -1.62
RXRBP28702 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.94□□□□□ -1.62
RXRBP28702 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RXRBP28702 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RXRBP28702 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RXRBP28702 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RXRBP28702 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RXRBP28702 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RXRBP28702 RNU4-35P-201ENST00000362588 141 ntBASIC4.93□□□□□ -1.62
RXRBP28702 RNU6-214P-201ENST00000384130 107 ntBASIC4.93□□□□□ -1.62
RXRBP28702 SNORD51-201ENST00000384320 80 ntBASIC4.93□□□□□ -1.62
RXRBP28702 Y_RNA.577-201ENST00000384794 101 ntBASIC4.93□□□□□ -1.62
RXRBP28702 SNORD96B-201ENST00000386148 79 ntBASIC4.93□□□□□ -1.62
RXRBP28702 AL139039.1-201ENST00000401900 692 ntBASIC4.93□□□□□ -1.62
RXRBP28702 RNU6-1156P-201ENST00000410365 100 ntBASIC4.93□□□□□ -1.62
RXRBP28702 RNU6-174P-201ENST00000410406 106 ntBASIC4.93□□□□□ -1.62
RXRBP28702 AP000275.1-201ENST00000411943 390 ntBASIC4.93□□□□□ -1.62
RXRBP28702 MTCO3P19-201ENST00000415864 321 ntBASIC4.93□□□□□ -1.62
RXRBP28702 RPL30P3-201ENST00000424262 333 ntBASIC4.93□□□□□ -1.62
RXRBP28702 RPS20P1-201ENST00000434853 354 ntBASIC4.93□□□□□ -1.62
RXRBP28702 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.93□□□□□ -1.62
RXRBP28702 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.93□□□□□ -1.62
RXRBP28702 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 PRELID3BP1-201ENST00000457142 540 ntBASIC4.93□□□□□ -1.62
RXRBP28702 AC011005.2-201ENST00000487324 359 ntBASIC4.93□□□□□ -1.62
RXRBP28702 RPL17P19-201ENST00000489069 552 ntBASIC4.93□□□□□ -1.62
RXRBP28702 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.93□□□□□ -1.62
RXRBP28702 HMGB1P35-201ENST00000503360 598 ntBASIC4.93□□□□□ -1.62
RXRBP28702 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.93□□□□□ -1.62
RXRBP28702 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.93□□□□□ -1.62
RXRBP28702 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.93□□□□□ -1.62
RXRBP28702 MIR5004-201ENST00000579078 107 ntBASIC4.93□□□□□ -1.62
RXRBP28702 ELOCP5-201ENST00000604924 333 ntBASIC4.93□□□□□ -1.62
RXRBP28702 SNHG22-203ENST00000617833 660 ntBASIC4.93□□□□□ -1.62
RXRBP28702 AC093535.2-201ENST00000624769 2326 ntBASIC4.93□□□□□ -1.62
RXRBP28702 AL137003.2-201ENST00000606924 2538 ntBASIC4.93□□□□□ -1.62
RXRBP28702 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RXRBP28702 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RXRBP28702 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.93□□□□□ -1.62
RXRBP28702 PABPC1P7-201ENST00000413177 1513 ntBASIC4.92□□□□□ -1.62
RXRBP28702 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.92□□□□□ -1.62
RXRBP28702 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 Y_RNA.19-201ENST00000362462 99 ntBASIC4.92□□□□□ -1.62
RXRBP28702 Y_RNA.105-201ENST00000363182 111 ntBASIC4.92□□□□□ -1.62
RXRBP28702 Y_RNA.150-201ENST00000363562 102 ntBASIC4.92□□□□□ -1.62
RXRBP28702 RNU6-701P-201ENST00000384059 107 ntBASIC4.92□□□□□ -1.62
RXRBP28702 MIR195-201ENST00000385194 87 ntBASIC4.92□□□□□ -1.62
RXRBP28702 RNU6-293P-201ENST00000411259 106 ntBASIC4.92□□□□□ -1.62
RXRBP28702 AL137014.1-201ENST00000420490 1226 ntBASIC4.92□□□□□ -1.62
RXRBP28702 AC010655.1-201ENST00000449336 292 ntBASIC4.92□□□□□ -1.62
RXRBP28702 Y_RNA.700-201ENST00000516806 100 ntBASIC4.92□□□□□ -1.62
RXRBP28702 SNORA81.3-201ENST00000517283 198 ntBASIC4.92□□□□□ -1.62
RXRBP28702 AC130289.1-201ENST00000577321 73 ntBASIC4.92□□□□□ -1.62
RXRBP28702 AC007566.2-201ENST00000603642 413 ntBASIC4.92□□□□□ -1.62
RXRBP28702 AL138825.1-201ENST00000618587 192 ntBASIC4.92□□□□□ -1.62
RXRBP28702 MIR7702-201ENST00000621931 59 ntBASIC4.92□□□□□ -1.62
RXRBP28702 AC005086.4-201ENST00000623065 213 ntBASIC4.92□□□□□ -1.62
RXRBP28702 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.92□□□□□ -1.62
RXRBP28702 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RXRBP28702 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.92□□□□□ -1.62
RXRBP28702 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.92□□□□□ -1.62
RXRBP28702 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RXRBP28702 AC118273.1-201ENST00000525324 3006 ntBASIC4.91□□□□□ -1.62
RXRBP28702 LINC01109-201ENST00000603837 3081 ntBASIC4.91□□□□□ -1.62
RXRBP28702 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.91□□□□□ -1.62
RXRBP28702 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.91□□□□□ -1.62
RXRBP28702 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RXRBP28702 RNU6-637P-201ENST00000384050 107 ntBASIC4.91□□□□□ -1.62
RXRBP28702 RNU6-746P-201ENST00000384112 109 ntBASIC4.91□□□□□ -1.62
RXRBP28702 MIR548I2-201ENST00000408348 149 ntBASIC4.91□□□□□ -1.62
RXRBP28702 RNA5SP293-201ENST00000410527 113 ntBASIC4.91□□□□□ -1.62
RXRBP28702 UBE2FP1-201ENST00000416536 447 ntBASIC4.91□□□□□ -1.62
RXRBP28702 UBE2V1P4-201ENST00000425374 344 ntBASIC4.91□□□□□ -1.62
RXRBP28702 AL133396.1-201ENST00000432048 687 ntBASIC4.91□□□□□ -1.62
RXRBP28702 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms