Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
VARSP26640 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VARSP26640 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VARSP26640 RNU5B-2P-201ENST00000363036 113 ntBASIC5.05□□□□□ -1.6
VARSP26640 Y_RNA.101-201ENST00000363154 102 ntBASIC5.05□□□□□ -1.6
VARSP26640 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VARSP26640 Y_RNA.420-201ENST00000384043 110 ntBASIC5.05□□□□□ -1.6
VARSP26640 MIR124-3-201ENST00000384866 87 ntBASIC5.05□□□□□ -1.6
VARSP26640 AL078599.1-201ENST00000402075 293 ntBASIC5.05□□□□□ -1.6
VARSP26640 MTHFD2P2-201ENST00000407725 247 ntBASIC5.05□□□□□ -1.6
VARSP26640 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.05□□□□□ -1.6
VARSP26640 CYP4F29P-201ENST00000420685 446 ntBASIC5.05□□□□□ -1.6
VARSP26640 OR2AH1P-201ENST00000425717 928 ntBASIC5.05□□□□□ -1.6
VARSP26640 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.05□□□□□ -1.6
VARSP26640 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 H2AFZP5-201ENST00000446960 382 ntBASIC5.05□□□□□ -1.6
VARSP26640 AC074290.1-201ENST00000448883 135 ntBASIC5.05□□□□□ -1.6
VARSP26640 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.05□□□□□ -1.6
VARSP26640 RN7SL860P-201ENST00000473738 223 ntBASIC5.05□□□□□ -1.6
VARSP26640 CYCTP-201ENST00000504253 315 ntBASIC5.05□□□□□ -1.6
VARSP26640 MLLT10P2-201ENST00000506434 249 ntBASIC5.05□□□□□ -1.6
VARSP26640 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.05□□□□□ -1.6
VARSP26640 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 MIR4431-201ENST00000579990 94 ntBASIC5.05□□□□□ -1.6
VARSP26640 AC006116.3-201ENST00000592968 361 ntBASIC5.05□□□□□ -1.6
VARSP26640 RNA5SP108-201ENST00000605921 117 ntBASIC5.05□□□□□ -1.6
VARSP26640 MIR3658-201ENST00000636291 56 ntBASIC5.05□□□□□ -1.6
VARSP26640 U6.99-201ENST00000637524 83 ntBASIC5.05□□□□□ -1.6
VARSP26640 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VARSP26640 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.05□□□□□ -1.6
VARSP26640 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VARSP26640 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.05□□□□□ -1.6
VARSP26640 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VARSP26640 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.04□□□□□ -1.6
VARSP26640 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 SAMMSON-226ENST00000642089 1582 ntBASIC5.04□□□□□ -1.6
VARSP26640 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 RNU6-899P-201ENST00000363947 107 ntBASIC5.04□□□□□ -1.6
VARSP26640 RNU6-898P-201ENST00000365627 104 ntBASIC5.04□□□□□ -1.6
VARSP26640 RNU2-68P-201ENST00000410878 191 ntBASIC5.04□□□□□ -1.6
VARSP26640 RNU6-1245P-201ENST00000411130 106 ntBASIC5.04□□□□□ -1.6
VARSP26640 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.04□□□□□ -1.6
VARSP26640 AC079168.2-201ENST00000453977 416 ntBASIC5.04□□□□□ -1.6
VARSP26640 RNU6-1198P-201ENST00000516904 67 ntBASIC5.04□□□□□ -1.6
VARSP26640 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.04□□□□□ -1.6
VARSP26640 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.04□□□□□ -1.6
VARSP26640 DEFB117-201ENST00000602356 141 ntBASIC5.04□□□□□ -1.6
VARSP26640 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VARSP26640 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VARSP26640 SRP72P2-201ENST00000344851 1979 ntBASIC5.04□□□□□ -1.6
VARSP26640 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.03□□□□□ -1.6
VARSP26640 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VARSP26640 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VARSP26640 RNU6-199P-201ENST00000362954 107 ntBASIC5.03□□□□□ -1.6
VARSP26640 U3.2-201ENST00000362981 210 ntBASIC5.03□□□□□ -1.6
VARSP26640 RNA5SP90-201ENST00000364801 99 ntBASIC5.03□□□□□ -1.6
VARSP26640 U3.36-201ENST00000408418 213 ntBASIC5.03□□□□□ -1.6
VARSP26640 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.03□□□□□ -1.6
VARSP26640 AC093162.1-201ENST00000419682 124 ntBASIC5.03□□□□□ -1.6
VARSP26640 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
VARSP26640 AL590762.4-201ENST00000425885 253 ntBASIC5.03□□□□□ -1.6
VARSP26640 AC092017.2-201ENST00000427600 362 ntBASIC5.03□□□□□ -1.6
VARSP26640 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.03□□□□□ -1.6
VARSP26640 RN7SL808P-201ENST00000496066 299 ntBASIC5.03□□□□□ -1.6
VARSP26640 AC107027.2-201ENST00000512197 115 ntBASIC5.03□□□□□ -1.6
VARSP26640 RNU6-155P-201ENST00000516347 100 ntBASIC5.03□□□□□ -1.6
VARSP26640 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.03□□□□□ -1.6
VARSP26640 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.03□□□□□ -1.6
VARSP26640 AC024153.1-201ENST00000603103 365 ntBASIC5.03□□□□□ -1.6
VARSP26640 AC100827.5-201ENST00000615883 426 ntBASIC5.03□□□□□ -1.6
VARSP26640 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.03□□□□□ -1.6
VARSP26640 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VARSP26640 AC025031.4-201ENST00000621248 3271 ntBASIC5.03□□□□□ -1.6
VARSP26640 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VARSP26640 AL356489.2-201ENST00000566968 3528 ntBASIC5.02□□□□□ -1.61
VARSP26640 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VARSP26640 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VARSP26640 SNORA17.1-201ENST00000362945 126 ntBASIC5.02□□□□□ -1.61
VARSP26640 U3.3-201ENST00000362986 216 ntBASIC5.02□□□□□ -1.61
VARSP26640 U3.15-201ENST00000365398 212 ntBASIC5.02□□□□□ -1.61
VARSP26640 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VARSP26640 U3.19-201ENST00000390893 196 ntBASIC5.02□□□□□ -1.61
VARSP26640 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms