Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
USF1P22415 Y_RNA.46-201ENST00000362695 102 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNA5SP37-201ENST00000365420 130 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNY3P13-201ENST00000365542 102 ntBASIC1.82□□□□□ -2.12
USF1P22415 SNORA67.3-201ENST00000384366 140 ntBASIC1.82□□□□□ -2.12
USF1P22415 SNORA51.11-201ENST00000384442 131 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNU1-148P-201ENST00000384472 162 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNU6-925P-201ENST00000384629 104 ntBASIC1.82□□□□□ -2.12
USF1P22415 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USF1P22415 MIR1302-8-201ENST00000408342 128 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNU2-63P-201ENST00000410792 194 ntBASIC1.82□□□□□ -2.12
USF1P22415 SRIP2-201ENST00000428470 166 ntBASIC1.82□□□□□ -2.12
USF1P22415 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.82□□□□□ -2.12
USF1P22415 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.82□□□□□ -2.12
USF1P22415 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.82□□□□□ -2.12
USF1P22415 RPS15AP9-201ENST00000439856 381 ntBASIC1.82□□□□□ -2.12
USF1P22415 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.82□□□□□ -2.12
USF1P22415 GPM6BP3-201ENST00000442797 145 ntBASIC1.82□□□□□ -2.12
USF1P22415 PSPHP1-201ENST00000450062 261 ntBASIC1.82□□□□□ -2.12
USF1P22415 DUXAP8-207ENST00000456786 622 ntBASIC1.82□□□□□ -2.12
USF1P22415 MTND2P39-201ENST00000457230 764 ntBASIC1.82□□□□□ -2.12
USF1P22415 AC004263.1-201ENST00000479327 332 ntBASIC1.82□□□□□ -2.12
USF1P22415 MTND1P3-201ENST00000484956 952 ntBASIC1.82□□□□□ -2.12
USF1P22415 AC022493.1-201ENST00000492984 337 ntBASIC1.82□□□□□ -2.12
USF1P22415 GTF2IP9-201ENST00000502460 301 ntBASIC1.82□□□□□ -2.12
USF1P22415 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.82□□□□□ -2.12
USF1P22415 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.82□□□□□ -2.12
USF1P22415 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
USF1P22415 RNU6-572P-201ENST00000516724 80 ntBASIC1.82□□□□□ -2.12
USF1P22415 ACA59.2-201ENST00000517061 156 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNU6-548P-201ENST00000517083 115 ntBASIC1.82□□□□□ -2.12
USF1P22415 RNU6-1003P-201ENST00000517099 105 ntBASIC1.82□□□□□ -2.12
USF1P22415 AC009902.1-201ENST00000519351 183 ntBASIC1.82□□□□□ -2.12
USF1P22415 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.82□□□□□ -2.12
USF1P22415 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.82□□□□□ -2.12
USF1P22415 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.82□□□□□ -2.12
USF1P22415 AC012213.3-201ENST00000577199 777 ntBASIC1.82□□□□□ -2.12
USF1P22415 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.82□□□□□ -2.12
USF1P22415 AL138963.2-201ENST00000605137 226 ntBASIC1.82□□□□□ -2.12
USF1P22415 AL121917.1-203ENST00000605534 577 ntBASIC1.82□□□□□ -2.12
USF1P22415 AL139022.2-201ENST00000606934 443 ntBASIC1.82□□□□□ -2.12
USF1P22415 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.82□□□□□ -2.12
USF1P22415 AC009974.1-201ENST00000608881 455 ntBASIC1.82□□□□□ -2.12
USF1P22415 AL365204.3-201ENST00000612448 685 ntBASIC1.82□□□□□ -2.12
USF1P22415 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
USF1P22415 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USF1P22415 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
USF1P22415 CKAP2P1-201ENST00000555477 2049 ntBASIC1.82□□□□□ -2.12
USF1P22415 MTND4P16-201ENST00000466108 1367 ntBASIC1.82□□□□□ -2.12
USF1P22415 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
USF1P22415 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
USF1P22415 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
USF1P22415 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USF1P22415 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.81□□□□□ -2.12
USF1P22415 Y_RNA.302-201ENST00000364997 102 ntBASIC1.81□□□□□ -2.12
USF1P22415 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.81□□□□□ -2.12
USF1P22415 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 HMGN2P38-201ENST00000423806 265 ntBASIC1.81□□□□□ -2.12
USF1P22415 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.81□□□□□ -2.12
USF1P22415 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.81□□□□□ -2.12
USF1P22415 RPL7P12-201ENST00000446719 750 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC023194.1-201ENST00000493084 308 ntBASIC1.81□□□□□ -2.12
USF1P22415 RPL38P4-201ENST00000502376 214 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC091951.3-201ENST00000504093 246 ntBASIC1.81□□□□□ -2.12
USF1P22415 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 SMURF2P1-201ENST00000514992 481 ntBASIC1.81□□□□□ -2.12
USF1P22415 RNU5A-4P-201ENST00000516588 111 ntBASIC1.81□□□□□ -2.12
USF1P22415 SCARNA16.3-201ENST00000516595 184 ntBASIC1.81□□□□□ -2.12
USF1P22415 RNU7-193P-201ENST00000516723 65 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC025755.1-201ENST00000521306 278 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC118273.2-201ENST00000532092 465 ntBASIC1.81□□□□□ -2.12
USF1P22415 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 MTND1P8-201ENST00000571424 950 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USF1P22415 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.81□□□□□ -2.12
USF1P22415 AC025165.5-201ENST00000602802 578 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC034229.4-201ENST00000607861 441 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC107214.2-201ENST00000608204 634 ntBASIC1.81□□□□□ -2.12
USF1P22415 uc_338.12-201ENST00000616344 181 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC009233.1-201ENST00000616477 371 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC021755.4-201ENST00000616620 456 ntBASIC1.81□□□□□ -2.12
USF1P22415 MIR5739-201ENST00000619803 80 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC009831.4-201ENST00000620744 325 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC138627.2-201ENST00000624202 601 ntBASIC1.81□□□□□ -2.12
USF1P22415 AL512643.1-201ENST00000635735 524 ntBASIC1.81□□□□□ -2.12
USF1P22415 MTND5P42-201ENST00000637720 498 ntBASIC1.81□□□□□ -2.12
USF1P22415 AC106754.1-201ENST00000562632 1513 ntBASIC1.81□□□□□ -2.12
USF1P22415 RNA5SP99-201ENST00000364020 114 ntBASIC1.8□□□□□ -2.12
USF1P22415 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
USF1P22415 RNA5SP240-201ENST00000365355 128 ntBASIC1.8□□□□□ -2.12
USF1P22415 SNORA48.3-201ENST00000391081 134 ntBASIC1.8□□□□□ -2.12
USF1P22415 RNA5SP270-201ENST00000411361 118 ntBASIC1.8□□□□□ -2.12
USF1P22415 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms