Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC005771.1-201ENST00000585581 349 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC080078.2-201ENST00000603766 501 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL5A1P20908 AC004492.1-201ENST00000607036 742 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.73□□□□□ -2.13
COL5A1P20908 AC005332.10-201ENST00000612725 619 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC090116.1-201ENST00000615679 446 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 AC068792.1-201ENST00000621354 417 ntBASIC1.73□□□□□ -2.13
COL5A1P20908 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL5A1P20908 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL5A1P20908 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.72□□□□□ -2.13
COL5A1P20908 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL5A1P20908 RNU4-91P-201ENST00000364778 135 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
COL5A1P20908 SNORA40.3-201ENST00000390964 122 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 MIR1284-201ENST00000408337 120 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 RPL21P32-201ENST00000419877 477 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.72□□□□□ -2.13
COL5A1P20908 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.72□□□□□ -2.13
COL5A1P20908 BMI1P1-201ENST00000445879 941 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AL592447.1-201ENST00000447592 540 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.72□□□□□ -2.13
COL5A1P20908 snoU109.1-201ENST00000459339 135 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL5A1P20908 AP000797.1-201ENST00000478870 387 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.72□□□□□ -2.13
COL5A1P20908 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.72□□□□□ -2.13
COL5A1P20908 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.72□□□□□ -2.13
COL5A1P20908 AC093809.1-201ENST00000509155 340 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AC109464.2-201ENST00000510242 943 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.72□□□□□ -2.13
COL5A1P20908 AC010625.1-201ENST00000511296 403 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 IGLV3-17-201ENST00000519099 244 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AP002748.2-201ENST00000528671 348 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.72□□□□□ -2.13
COL5A1P20908 MIR4452-201ENST00000583004 71 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.72□□□□□ -2.13
COL5A1P20908 AC087683.1-201ENST00000591187 441 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 BNIP3P23-201ENST00000599655 511 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AL355812.1-201ENST00000603215 216 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 NDUFA8P1-201ENST00000605525 367 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AC007684.1-201ENST00000609671 477 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 uc_338.5-201ENST00000611839 155 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AC009878.1-201ENST00000621819 340 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AP003122.6-201ENST00000623831 495 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AL359740.1-201ENST00000624340 592 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL5A1P20908 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
COL5A1P20908 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.72□□□□□ -2.13
COL5A1P20908 MTND5P35-201ENST00000557537 1720 ntBASIC1.71□□□□□ -2.13
COL5A1P20908 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
COL5A1P20908 AC092447.10-201ENST00000620607 1652 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 UBE2L2-201ENST00000254302 429 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL5A1P20908 RNU4-21P-201ENST00000362802 126 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.71□□□□□ -2.14
COL5A1P20908 RNU6-259P-201ENST00000383999 107 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RNU6-1042P-201ENST00000384204 107 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 SNORD51-201ENST00000384320 80 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RPS20P2-201ENST00000402520 389 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 MIR1305-201ENST00000408300 86 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RNU2-47P-201ENST00000410649 186 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RNU2-15P-201ENST00000410692 191 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 MTCO1P17-201ENST00000411522 491 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 MTCO2P5-201ENST00000422621 426 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.71□□□□□ -2.14
COL5A1P20908 SUMO1P4-201ENST00000429430 302 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.71□□□□□ -2.14
COL5A1P20908 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 SDCBPP1-201ENST00000440192 890 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 TRGVB-201ENST00000453257 471 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 SNORD121B-201ENST00000458838 81 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RNU6-956P-201ENST00000458868 103 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 TOMM22P6-201ENST00000465035 409 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.71□□□□□ -2.14
COL5A1P20908 HMGB1P36-201ENST00000487709 576 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 COX7A2P2-201ENST00000505291 250 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 MTND2P33-201ENST00000506452 1031 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL5A1P20908 RNU6-1003P-201ENST00000517099 105 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RNU6-711P-201ENST00000517255 106 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.71□□□□□ -2.14
COL5A1P20908 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.71□□□□□ -2.14
COL5A1P20908 AC137800.2-201ENST00000574375 120 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.71□□□□□ -2.14
COL5A1P20908 MIR3167-201ENST00000579623 85 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AL390208.1-201ENST00000605885 644 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.71□□□□□ -2.14
COL5A1P20908 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
COL5A1P20908 AC007014.2-201ENST00000615581 479 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms