Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MRPL42P6-201ENST00000486397 371 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
XRCC1P18887 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.31□□□□□ -2.04
XRCC1P18887 AC006199.1-201ENST00000548728 219 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 BNIP3P8-201ENST00000597863 560 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AL451064.1-201ENST00000607718 471 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AL589743.7-201ENST00000612637 233 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 CU459211.1-201ENST00000635667 749 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AL512643.1-201ENST00000635735 524 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 Z99571.1-201ENST00000636677 394 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 U6.99-201ENST00000637524 83 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
XRCC1P18887 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
XRCC1P18887 AP000568.1-201ENST00000282964 442 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 RNY1P12-201ENST00000364251 105 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 ELOCP4-201ENST00000420090 333 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AL109913.1-201ENST00000421173 514 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.3□□□□□ -2.04
XRCC1P18887 AL445567.1-201ENST00000439121 144 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 AL161651.1-201ENST00000440882 223 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.3□□□□□ -2.04
XRCC1P18887 AC098862.1-201ENST00000504991 413 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC010486.2-201ENST00000505572 483 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC109927.2-201ENST00000506416 303 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 HMGB3P3-201ENST00000510526 400 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC008549.1-201ENST00000512900 643 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 SCARNA17.1-201ENST00000516211 143 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 SCARNA17.2-201ENST00000516334 143 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 RNU6-914P-201ENST00000516749 109 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 RNU6-1183P-201ENST00000517054 60 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 RNU6-1315P-201ENST00000517187 99 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.3□□□□□ -2.04
XRCC1P18887 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 MIR4782-201ENST00000577987 79 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 MIR1273C-201ENST00000578669 77 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC009977.1-201ENST00000586015 570 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.3□□□□□ -2.04
XRCC1P18887 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.3□□□□□ -2.04
XRCC1P18887 SCARNA17.4-201ENST00000614296 143 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.3□□□□□ -2.04
XRCC1P18887 AC007494.3-201ENST00000624660 743 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC025048.6-202ENST00000627667 438 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 AC004520.1-201ENST00000608362 1413 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.3□□□□□ -2.04
XRCC1P18887 AC004944.1-201ENST00000517807 3059 ntBASIC2.3□□□□□ -2.04
XRCC1P18887 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.29□□□□□ -2.04
XRCC1P18887 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
XRCC1P18887 RNU5E-1-201ENST00000362477 120 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 RNU4-91P-201ENST00000364778 135 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 AL135786.1-201ENST00000415892 214 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 USP9YP27-201ENST00000418455 438 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.29□□□□□ -2.04
XRCC1P18887 CYCSP46-201ENST00000423569 204 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 MICF-203ENST00000432679 129 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 RPS24P1-201ENST00000438550 371 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 PGBD4P3-201ENST00000440731 581 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.29□□□□□ -2.04
XRCC1P18887 snoU109.1-201ENST00000459339 135 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 MTCO2P6-201ENST00000463134 685 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.29□□□□□ -2.04
XRCC1P18887 TRBV12-1-201ENST00000479785 344 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.29□□□□□ -2.04
XRCC1P18887 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.29□□□□□ -2.04
XRCC1P18887 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.29□□□□□ -2.04
XRCC1P18887 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 MIR3117-201ENST00000584034 78 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.29□□□□□ -2.04
XRCC1P18887 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.29□□□□□ -2.04
XRCC1P18887 AC091304.9-201ENST00000612091 226 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 AL359547.2-201ENST00000615810 418 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.29□□□□□ -2.04
XRCC1P18887 AL160394.1-201ENST00000624765 724 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
XRCC1P18887 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.29□□□□□ -2.04
XRCC1P18887 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
XRCC1P18887 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
XRCC1P18887 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
XRCC1P18887 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
XRCC1P18887 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
XRCC1P18887 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
XRCC1P18887 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 RPS3AP36-201ENST00000398190 775 ntBASIC2.28□□□□□ -2.04
XRCC1P18887 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms