Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR2114-201ENST00000516645 80 ntBASIC4.73□□□□□ -1.65
LIG1P18858 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.73□□□□□ -1.65
LIG1P18858 TRAV32-201ENST00000553993 340 ntBASIC4.73□□□□□ -1.65
LIG1P18858 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.73□□□□□ -1.65
LIG1P18858 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.73□□□□□ -1.65
LIG1P18858 AC005951.2-201ENST00000576282 495 ntBASIC4.73□□□□□ -1.65
LIG1P18858 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.73□□□□□ -1.65
LIG1P18858 AC006023.2-201ENST00000609916 167 ntBASIC4.73□□□□□ -1.65
LIG1P18858 RMST_4.1-201ENST00000616886 107 ntBASIC4.73□□□□□ -1.65
LIG1P18858 AL159153.1-201ENST00000619688 317 ntBASIC4.73□□□□□ -1.65
LIG1P18858 SNORD39.4-201ENST00000620099 78 ntBASIC4.73□□□□□ -1.65
LIG1P18858 FP236240.3-201ENST00000623061 327 ntBASIC4.73□□□□□ -1.65
LIG1P18858 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LIG1P18858 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIG1P18858 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LIG1P18858 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIG1P18858 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.72□□□□□ -1.65
LIG1P18858 RNU1-14P-201ENST00000362759 152 ntBASIC4.72□□□□□ -1.65
LIG1P18858 RNY3P11-201ENST00000364153 102 ntBASIC4.72□□□□□ -1.65
LIG1P18858 SNORA70.2-201ENST00000364506 135 ntBASIC4.72□□□□□ -1.65
LIG1P18858 RNU6-806P-201ENST00000365147 105 ntBASIC4.72□□□□□ -1.65
LIG1P18858 RNA5SP366-201ENST00000365454 123 ntBASIC4.72□□□□□ -1.65
LIG1P18858 SNORA36C-201ENST00000384289 132 ntBASIC4.72□□□□□ -1.65
LIG1P18858 Y_RNA.478-201ENST00000384358 107 ntBASIC4.72□□□□□ -1.65
LIG1P18858 RNU6-1093P-201ENST00000391194 107 ntBASIC4.72□□□□□ -1.65
LIG1P18858 AL132765.1-201ENST00000434165 553 ntBASIC4.72□□□□□ -1.65
LIG1P18858 AL590664.1-201ENST00000448065 339 ntBASIC4.72□□□□□ -1.65
LIG1P18858 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.72□□□□□ -1.65
LIG1P18858 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.72□□□□□ -1.65
LIG1P18858 AC025465.3-201ENST00000510570 311 ntBASIC4.72□□□□□ -1.65
LIG1P18858 APOOP4-201ENST00000513530 597 ntBASIC4.72□□□□□ -1.65
LIG1P18858 GMPSP1-201ENST00000514075 579 ntBASIC4.72□□□□□ -1.65
LIG1P18858 RNU6-911P-201ENST00000516523 104 ntBASIC4.72□□□□□ -1.65
LIG1P18858 SNORA40.15-201ENST00000516884 107 ntBASIC4.72□□□□□ -1.65
LIG1P18858 MRPL49P2-201ENST00000521066 465 ntBASIC4.72□□□□□ -1.65
LIG1P18858 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.72□□□□□ -1.65
LIG1P18858 AC096772.1-201ENST00000609146 564 ntBASIC4.72□□□□□ -1.65
LIG1P18858 MIR6716-201ENST00000613413 80 ntBASIC4.72□□□□□ -1.65
LIG1P18858 AL445567.2-201ENST00000618935 498 ntBASIC4.72□□□□□ -1.65
LIG1P18858 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIG1P18858 MIR3653-201ENST00000625572 110 ntBASIC4.72□□□□□ -1.65
LIG1P18858 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.72□□□□□ -1.65
LIG1P18858 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LIG1P18858 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIG1P18858 OTUD4P1-201ENST00000237841 3067 ntBASIC4.71□□□□□ -1.65
LIG1P18858 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
LIG1P18858 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LIG1P18858 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.71□□□□□ -1.65
LIG1P18858 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIG1P18858 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LIG1P18858 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIG1P18858 Y_RNA.19-201ENST00000362462 99 ntBASIC4.71□□□□□ -1.66
LIG1P18858 Y_RNA.117-201ENST00000363294 101 ntBASIC4.71□□□□□ -1.66
LIG1P18858 U8.8-201ENST00000365399 135 ntBASIC4.71□□□□□ -1.66
LIG1P18858 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LIG1P18858 SAR1AP2-201ENST00000392696 594 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AL591034.2-201ENST00000402839 359 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AL513475.1-201ENST00000406602 315 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.71□□□□□ -1.66
LIG1P18858 MTCO3P19-201ENST00000415864 321 ntBASIC4.71□□□□□ -1.66
LIG1P18858 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIG1P18858 AL451062.2-201ENST00000427515 271 ntBASIC4.71□□□□□ -1.66
LIG1P18858 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.71□□□□□ -1.66
LIG1P18858 RPS3AP46-201ENST00000448352 682 ntBASIC4.71□□□□□ -1.66
LIG1P18858 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIG1P18858 AC087588.1-201ENST00000462203 316 ntBASIC4.71□□□□□ -1.66
LIG1P18858 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.71□□□□□ -1.66
LIG1P18858 FO393415.2-201ENST00000480085 343 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AC091167.1-201ENST00000492017 396 ntBASIC4.71□□□□□ -1.66
LIG1P18858 SUMO2P6-201ENST00000505273 288 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AC008958.1-201ENST00000511047 682 ntBASIC4.71□□□□□ -1.66
LIG1P18858 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.71□□□□□ -1.66
LIG1P18858 AP004371.1-201ENST00000525240 214 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.71□□□□□ -1.66
LIG1P18858 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.71□□□□□ -1.66
LIG1P18858 AC090517.1-201ENST00000569307 266 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AC098479.1-201ENST00000609225 154 ntBASIC4.71□□□□□ -1.66
LIG1P18858 AL353748.2-201ENST00000622148 471 ntBASIC4.71□□□□□ -1.66
LIG1P18858 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIG1P18858 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.71□□□□□ -1.66
LIG1P18858 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.71□□□□□ -1.66
LIG1P18858 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LIG1P18858 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.7□□□□□ -1.66
LIG1P18858 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LIG1P18858 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LIG1P18858 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LIG1P18858 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LIG1P18858 RNU6-933P-201ENST00000384424 107 ntBASIC4.7□□□□□ -1.66
LIG1P18858 SNORA51.11-201ENST00000384442 131 ntBASIC4.7□□□□□ -1.66
LIG1P18858 RPL21P66-201ENST00000426566 466 ntBASIC4.7□□□□□ -1.66
LIG1P18858 MTATP6P4-201ENST00000427725 675 ntBASIC4.7□□□□□ -1.66
LIG1P18858 AC006946.1-201ENST00000429106 328 ntBASIC4.7□□□□□ -1.66
LIG1P18858 RANP8-201ENST00000444720 713 ntBASIC4.7□□□□□ -1.66
LIG1P18858 OR2AQ1P-201ENST00000451972 200 ntBASIC4.7□□□□□ -1.66
LIG1P18858 MTND4LP30-201ENST00000454092 297 ntBASIC4.7□□□□□ -1.66
LIG1P18858 RNU6-1037P-201ENST00000459571 107 ntBASIC4.7□□□□□ -1.66
LIG1P18858 RPL21P104-201ENST00000464143 478 ntBASIC4.7□□□□□ -1.66
LIG1P18858 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.7□□□□□ -1.66
LIG1P18858 RNU6-897P-201ENST00000517135 105 ntBASIC4.7□□□□□ -1.66
LIG1P18858 RNU6-1073P-201ENST00000517182 106 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms