Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC019176.2-201ENST00000611579 315 ntBASIC2.86□□□□□ -1.95
HLA-DOBP13765 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
HLA-DOBP13765 AC012314.7-201ENST00000619693 93 ntBASIC2.86□□□□□ -1.95
HLA-DOBP13765 CUL1P1-201ENST00000509510 2425 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 SRP72P2-201ENST00000344851 1979 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 Y_RNA.480-201ENST00000384364 102 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 RNU6-831P-201ENST00000384548 107 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 MIR578-201ENST00000384828 96 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 MIR325-201ENST00000385260 98 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 EI24P2-201ENST00000397776 1076 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AL356432.1-201ENST00000405809 419 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC245291.1-201ENST00000419501 328 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 RPL23AP69-201ENST00000431134 458 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC092573.2-201ENST00000434546 243 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 HMGB3P8-201ENST00000449709 577 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 CECR9-201ENST00000453421 199 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 SNORA19.2-201ENST00000516013 114 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 SNORA14.1-201ENST00000516113 141 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 CASP1P1-201ENST00000526345 212 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 CYCSP27-201ENST00000527643 293 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 SYF2P1-201ENST00000550658 413 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC012119.1-201ENST00000603184 222 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 AC008739.3-201ENST00000603262 127 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 CTHRC1P1-201ENST00000605383 469 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.85□□□□□ -1.95
HLA-DOBP13765 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HLA-DOBP13765 ZNF807-201ENST00000328088 1707 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 FAM35BP-202ENST00000497389 3337 ntBASIC2.85□□□□□ -1.95
HLA-DOBP13765 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DOBP13765 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNU6-805P-201ENST00000365643 106 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DOBP13765 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNVU1-14-201ENST00000384770 164 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNA5SP171-201ENST00000391071 115 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RPS4XP7-201ENST00000406274 780 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL591034.1-201ENST00000407447 340 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNU6-1025P-201ENST00000410629 104 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNU2-68P-201ENST00000410878 191 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 NDUFB4P5-201ENST00000415445 361 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC007390.1-201ENST00000415722 356 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL353678.1-201ENST00000422735 741 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC005326.1-201ENST00000429197 123 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 SNRPEP9-201ENST00000436794 238 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 PRSS3P4-201ENST00000453323 162 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL135752.1-201ENST00000479477 471 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AL049830.2-201ENST00000480072 201 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 HMGB1P30-201ENST00000492455 606 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNA5SP217-201ENST00000515959 91 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNU6-864P-201ENST00000516256 108 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 LRRC37A5P-203ENST00000580181 585 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC073539.2-201ENST00000597113 165 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 C8orf59P2-201ENST00000603441 271 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 ATP1B3P1-201ENST00000605365 821 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HLA-DOBP13765 MIR8058-201ENST00000615737 89 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC009233.1-201ENST00000616477 371 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 MIR6075-201ENST00000620782 95 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC005858.4-201ENST00000623191 700 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 AC027309.3-201ENST00000623419 351 ntBASIC2.84□□□□□ -1.95
HLA-DOBP13765 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DOBP13765 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HLA-DOBP13765 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.84□□□□□ -1.96
HLA-DOBP13765 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.84□□□□□ -1.96
HLA-DOBP13765 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DOBP13765 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.83□□□□□ -1.96
HLA-DOBP13765 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DOBP13765 RNA5SP383-201ENST00000362934 120 ntBASIC2.83□□□□□ -1.96
HLA-DOBP13765 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
HLA-DOBP13765 RNU6-217P-201ENST00000384164 104 ntBASIC2.83□□□□□ -1.96
HLA-DOBP13765 RNU6-140P-201ENST00000384566 108 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms