Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC108059.2-201ENST00000434626 151 ntBASIC4.28□□□□□ -1.72
ITGA4P13612 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.28□□□□□ -1.72
ITGA4P13612 HMGN2P13-201ENST00000476476 274 ntBASIC4.28□□□□□ -1.72
ITGA4P13612 FO393415.2-201ENST00000480085 343 ntBASIC4.28□□□□□ -1.72
ITGA4P13612 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.28□□□□□ -1.72
ITGA4P13612 SNORA70.16-201ENST00000516390 95 ntBASIC4.28□□□□□ -1.72
ITGA4P13612 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.28□□□□□ -1.72
ITGA4P13612 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.28□□□□□ -1.72
ITGA4P13612 HSBP1P1-201ENST00000555205 166 ntBASIC4.28□□□□□ -1.72
ITGA4P13612 MIR4273-201ENST00000582824 84 ntBASIC4.28□□□□□ -1.72
ITGA4P13612 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ITGA4P13612 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.28□□□□□ -1.72
ITGA4P13612 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.27□□□□□ -1.73
ITGA4P13612 AL136964.1-201ENST00000622038 2990 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ITGA4P13612 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ITGA4P13612 RNU6-1317P-201ENST00000364582 104 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ITGA4P13612 SNORA3.3-201ENST00000408712 125 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ITGA4P13612 PIGFP3-201ENST00000441918 722 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AL500522.2-201ENST00000448562 343 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 CECR9-201ENST00000453421 199 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AC112492.4-201ENST00000456549 352 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 RPL21P11-201ENST00000461458 483 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 KC877373.1-201ENST00000479066 408 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AC069499.1-201ENST00000489433 509 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 SNORA31.8-201ENST00000516327 108 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 RNU6-1073P-201ENST00000517182 106 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AC025755.1-201ENST00000521306 278 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AC007991.1-201ENST00000522680 631 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.27□□□□□ -1.73
ITGA4P13612 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.27□□□□□ -1.73
ITGA4P13612 CPDP1-201ENST00000579660 283 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.27□□□□□ -1.73
ITGA4P13612 AL713922.2-201ENST00000619384 716 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 AC039056.2-201ENST00000622261 511 ntBASIC4.27□□□□□ -1.73
ITGA4P13612 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.27□□□□□ -1.73
ITGA4P13612 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ITGA4P13612 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ITGA4P13612 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ITGA4P13612 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ITGA4P13612 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
ITGA4P13612 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.26□□□□□ -1.73
ITGA4P13612 RNU6-741P-201ENST00000383889 107 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 RNU6-1279P-201ENST00000383917 103 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 Y_RNA.424-201ENST00000384063 103 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 Y_RNA.577-201ENST00000384794 101 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 MIR200C-201ENST00000384980 68 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 Y_RNA.623-201ENST00000411128 95 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 AC087650.1-201ENST00000431445 468 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.26□□□□□ -1.73
ITGA4P13612 AL356535.1-201ENST00000440335 398 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.26□□□□□ -1.73
ITGA4P13612 AL133547.1-201ENST00000448546 220 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 NDUFB1P2-201ENST00000449477 176 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.26□□□□□ -1.73
ITGA4P13612 RNU6-1037P-201ENST00000459571 107 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 AC010655.3-201ENST00000478818 450 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.26□□□□□ -1.73
ITGA4P13612 MIR3668-201ENST00000582138 75 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.26□□□□□ -1.73
ITGA4P13612 AL355598.1-201ENST00000604169 202 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 HMGB1P50-201ENST00000605814 607 ntBASIC4.26□□□□□ -1.73
ITGA4P13612 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.26□□□□□ -1.73
ITGA4P13612 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ITGA4P13612 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.25□□□□□ -1.73
ITGA4P13612 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 RNY1P16-201ENST00000363063 111 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 RNU6-827P-201ENST00000365553 106 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 MIR10A-201ENST00000385043 110 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 MIR670-201ENST00000390142 98 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 RNU6-1156P-201ENST00000410365 100 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 SNORD56-201ENST00000413522 71 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.25□□□□□ -1.73
ITGA4P13612 GOT2P5-201ENST00000433995 546 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AC092573.2-201ENST00000434546 243 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
ITGA4P13612 CHEK2P4-201ENST00000450340 246 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AC139453.3-201ENST00000493276 369 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 MRPS35P2-201ENST00000508242 191 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 Vault.1-201ENST00000516474 102 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.25□□□□□ -1.73
ITGA4P13612 GNRHR2P1-201ENST00000555315 631 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.25□□□□□ -1.73
ITGA4P13612 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.25□□□□□ -1.73
ITGA4P13612 AC009314.1-201ENST00000603871 304 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.25□□□□□ -1.73
ITGA4P13612 AL121772.2-201ENST00000614331 297 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 AC112200.1-201ENST00000625015 234 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 MIR4272-201ENST00000635924 64 ntBASIC4.25□□□□□ -1.73
ITGA4P13612 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ITGA4P13612 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ITGA4P13612 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms