Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC009238.2-201ENST00000431026 355 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 RPL35AP21-201ENST00000437667 333 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 AC104332.1-201ENST00000440471 797 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.49□□□□□ -1.69
PDGFAP04085 NDUFB4P10-201ENST00000452541 359 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 RPL21P104-201ENST00000464143 478 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 SCARNA22-201ENST00000503991 125 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 RN7SKP21-201ENST00000516503 220 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.49□□□□□ -1.69
PDGFAP04085 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFAP04085 AC037487.3-201ENST00000606668 112 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PDGFAP04085 CR381572.2-201ENST00000624852 397 ntBASIC4.49□□□□□ -1.69
PDGFAP04085 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFAP04085 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PDGFAP04085 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFAP04085 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFAP04085 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PDGFAP04085 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.49□□□□□ -1.69
PDGFAP04085 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFAP04085 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFAP04085 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFAP04085 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PDGFAP04085 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFAP04085 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFAP04085 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFAP04085 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDGFAP04085 RNU6-858P-201ENST00000362436 107 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 Y_RNA.83-201ENST00000363005 113 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 Y_RNA.150-201ENST00000363562 102 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 MIR129-1-201ENST00000384972 72 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 AL357515.1-201ENST00000402967 542 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 SNORD12B-201ENST00000410433 91 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 ELOCP19-201ENST00000411919 318 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFAP04085 AC074117.2-201ENST00000417130 397 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 AC005002.2-201ENST00000438228 269 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFAP04085 ENPP7P9-201ENST00000514456 627 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 NACAP3-201ENST00000552100 481 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFAP04085 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFAP04085 SNORD113-5-201ENST00000607261 78 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 FAM27B-201ENST00000610601 213 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 AC068724.3-201ENST00000625906 87 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFAP04085 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFAP04085 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PDGFAP04085 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFAP04085 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFAP04085 AC090740.1-201ENST00000623193 2262 ntBASIC4.48□□□□□ -1.69
PDGFAP04085 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFAP04085 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFAP04085 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PDGFAP04085 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFAP04085 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 RNU5B-2P-201ENST00000363036 113 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 RNU6-137P-201ENST00000363680 108 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 RNA5SP447-201ENST00000363749 119 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 Y_RNA.319-201ENST00000365138 92 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 Y_RNA.504-201ENST00000384481 104 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 MIR1193-201ENST00000408109 78 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 RN7SKP16-201ENST00000410180 299 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 RNU5A-5P-201ENST00000411054 116 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 Y_RNA.793-201ENST00000411222 111 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL160275.2-201ENST00000412010 394 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.47□□□□□ -1.69
PDGFAP04085 AC096638.1-201ENST00000444678 216 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 SSXP4-201ENST00000451349 245 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL645939.1-201ENST00000453429 797 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 HSPE1P25-201ENST00000455484 251 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFAP04085 AC020890.1-201ENST00000491837 504 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 BTF3L4P4-201ENST00000506381 449 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 SEPT14P8-201ENST00000508026 178 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFAP04085 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFAP04085 MIR1254-2-201ENST00000579553 63 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL512605.2-201ENST00000592972 256 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL020997.2-201ENST00000602607 184 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL138963.2-201ENST00000605137 226 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 BRDTP1-201ENST00000605735 677 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AC005296.1-201ENST00000616145 209 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 AL022401.1-201ENST00000619498 108 ntBASIC4.47□□□□□ -1.69
PDGFAP04085 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PDGFAP04085 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFAP04085 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFAP04085 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDGFAP04085 AL133243.3-201ENST00000617415 3004 ntBASIC4.46□□□□□ -1.69
PDGFAP04085 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFAP04085 SNORD113.2-201ENST00000364166 89 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 RN7SKP280-201ENST00000364196 304 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 RNA5SP213-201ENST00000391031 106 ntBASIC4.46□□□□□ -1.7
PDGFAP04085 AC009237.10-201ENST00000414112 510 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms