Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 RNU6-217P-201ENST00000384164 104 ntBASIC2.8□□□□□ -1.96
RAF1P04049 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AL139397.2-201ENST00000404529 772 ntBASIC2.8□□□□□ -1.96
RAF1P04049 RN7SKP284-201ENST00000411002 343 ntBASIC2.8□□□□□ -1.96
RAF1P04049 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RAF1P04049 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.8□□□□□ -1.96
RAF1P04049 MTCYBP8-201ENST00000422855 651 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.8□□□□□ -1.96
RAF1P04049 HMGB1P27-201ENST00000431429 603 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 RPS12P18-201ENST00000442381 270 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 RNU6-261P-201ENST00000459506 102 ntBASIC2.8□□□□□ -1.96
RAF1P04049 GMFBP1-201ENST00000467831 427 ntBASIC2.8□□□□□ -1.96
RAF1P04049 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.8□□□□□ -1.96
RAF1P04049 RPS29P25-201ENST00000481709 171 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AC092436.1-201ENST00000506450 503 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AC108078.2-201ENST00000510750 236 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AC105417.1-201ENST00000514691 285 ntBASIC2.8□□□□□ -1.96
RAF1P04049 RNA5SP401-201ENST00000515920 127 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.8□□□□□ -1.96
RAF1P04049 H3F3AP1-201ENST00000559984 334 ntBASIC2.8□□□□□ -1.96
RAF1P04049 BNIP3P30-201ENST00000601184 574 ntBASIC2.8□□□□□ -1.96
RAF1P04049 AC136601.2-201ENST00000604356 474 ntBASIC2.8□□□□□ -1.96
RAF1P04049 NUTF2P8-201ENST00000604593 363 ntBASIC2.8□□□□□ -1.96
RAF1P04049 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAF1P04049 AL161629.2-201ENST00000615347 275 ntBASIC2.8□□□□□ -1.96
RAF1P04049 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RAF1P04049 YWHAEP7-203ENST00000622054 312 ntBASIC2.8□□□□□ -1.96
RAF1P04049 FER-210ENST00000628534 558 ntTSL 5 BASIC2.8□□□□□ -1.96
RAF1P04049 AC108206.1-201ENST00000570186 4159 ntBASIC2.8□□□□□ -1.96
RAF1P04049 CKAP2P1-201ENST00000555477 2049 ntBASIC2.8□□□□□ -1.96
RAF1P04049 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
RAF1P04049 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RAF1P04049 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
RAF1P04049 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAF1P04049 AC022336.2-201ENST00000568966 2538 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC004520.1-201ENST00000608362 1413 ntBASIC2.79□□□□□ -1.96
RAF1P04049 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RAF1P04049 FTLP6-201ENST00000355274 422 ntBASIC2.79□□□□□ -1.96
RAF1P04049 RNU6-1167P-201ENST00000363227 94 ntBASIC2.79□□□□□ -1.96
RAF1P04049 Y_RNA.255-201ENST00000364581 97 ntBASIC2.79□□□□□ -1.96
RAF1P04049 SNORD115-7-201ENST00000365306 82 ntBASIC2.79□□□□□ -1.96
RAF1P04049 RNU6-996P-201ENST00000365438 107 ntBASIC2.79□□□□□ -1.96
RAF1P04049 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RAF1P04049 RNU6-1029P-201ENST00000384109 107 ntBASIC2.79□□□□□ -1.96
RAF1P04049 Y_RNA.573-201ENST00000384763 105 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.79□□□□□ -1.96
RAF1P04049 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.79□□□□□ -1.96
RAF1P04049 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC073415.1-201ENST00000449240 153 ntBASIC2.79□□□□□ -1.96
RAF1P04049 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 RPL12P25-201ENST00000455592 494 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AL162395.1-201ENST00000457882 422 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AL163973.1-201ENST00000484753 577 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.79□□□□□ -1.96
RAF1P04049 RNA5SP471-201ENST00000516971 106 ntBASIC2.79□□□□□ -1.96
RAF1P04049 PSMA2P1-201ENST00000526365 646 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.79□□□□□ -1.96
RAF1P04049 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 AP005435.4-201ENST00000529514 284 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.79□□□□□ -1.96
RAF1P04049 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.79□□□□□ -1.96
RAF1P04049 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 AL365204.3-201ENST00000612448 685 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC107871.2-201ENST00000612894 502 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AP001486.3-201ENST00000615334 372 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AP003122.6-201ENST00000623831 495 ntBASIC2.79□□□□□ -1.96
RAF1P04049 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.79□□□□□ -1.96
RAF1P04049 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.79□□□□□ -1.96
RAF1P04049 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RAF1P04049 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.79□□□□□ -1.96
RAF1P04049 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RAF1P04049 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RAF1P04049 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
RAF1P04049 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RAF1P04049 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.78□□□□□ -1.96
RAF1P04049 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.78□□□□□ -1.96
RAF1P04049 UBE2L2-201ENST00000254302 429 ntBASIC2.78□□□□□ -1.96
RAF1P04049 RNU6-451P-201ENST00000362921 107 ntBASIC2.78□□□□□ -1.96
RAF1P04049 RNY3P3-201ENST00000363816 102 ntBASIC2.78□□□□□ -1.96
RAF1P04049 Y_RNA.390-201ENST00000383932 102 ntBASIC2.78□□□□□ -1.96
RAF1P04049 Y_RNA.576-201ENST00000384781 102 ntBASIC2.78□□□□□ -1.96
RAF1P04049 RNU6-1068P-201ENST00000410958 103 ntBASIC2.78□□□□□ -1.96
RAF1P04049 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.78□□□□□ -1.96
RAF1P04049 AC092809.3-201ENST00000415453 231 ntBASIC2.78□□□□□ -1.96
RAF1P04049 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.78□□□□□ -1.96
RAF1P04049 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.78□□□□□ -1.96
RAF1P04049 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.78□□□□□ -1.96
RAF1P04049 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms